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OJB®
Online Journal of
Bioinformatics
©
(Onl J
Bioinform©)
Established
1995
ISSN 1443-2250
Scientific Board : Managing Editors:
Guerrini VH., DVM, MVSc, MCompSci, PhD (Bioinformatics, IE),
Alexandra Huger Meister BA, MA (CH),
Rachel Durnsford BA (AU).
Scientific Board:
Ben-Miled Z., BSc, MSc, PhD (Computer Engineering, USA),
Bodèn M., BSc, MSc, PhD (Machine learning, sequence analysis, AU),
Böhringer S., MD, BSc, MSc, PhD (Genetic analysis, DE),
Bourne DWA., BPharm, PhD (Pharmacokinetics, USA),
Ceraj I., DipEng, MSc (Software engineering, MIT, USA),
Chen Y., BS, ME, PhD (Bioinformatics, Software electronic engineering, USA)
Colomb RM., BSc, PhD (Informatics, CA),
Daggard G., BSc, PhD (Genetics, AU),
Dressel U., BSc, Hons, PhD (Genetics, DE),
Dubitzky W., Dipl Ing, MSc, DPhil (Bioinformatics, DE),
Filippich LJ., BSc, BVSc, PhD (Genetics, AU),
Gao S., BS, PhD (Bioinformatics, USA),
Goswami C PhD (Molecular and Genomic Pathology, USA),Harrison J., BSc, MSc, PhD (Data-mining, USA),
Hughes I., BVSc, PhD, (Genetics AU),
Maetschke SR., MSc, PhD (Software, learning, processing, DE),
Jiang Y., BSc, MSc, Msc, PhD, (Data analysis, oncology, USA),
Lea R., BSc, PhD (Genetic analysis, AU),
Liu L BSc, MS, PhD (Biophysics, Bioinformatics, USA).
Lund EM., DVM, MPH, PhD (Informatics, USA),
Mallick B, M.Tech, PhD (Bioinformatics, USA),
Iquebal MA., BSc, MSc, PhD (Statistics, Bioinformatics, In).
Olsson BE., BSc, MSc, PhD (Bioinformatics, SE),
O'Kane KC., BS PhD (Bioinformatics, USA),
Shadnam MR., BSc, PhD (Nanotechnology, Computer Science, CA)
Shen L., BSc, PhD (Machine Learning, USA),
Singh S PhD., (Medical Education, Orthopaedics, IN)
Song M., PhD (Text Mining, Bioinformatics, Information, USA),
Tang S., BSc, MSc, PhD (Proteomics, Bioinformatics, USA).
Teasdale RG., BSc, PhD (Computational Cell Biology, AU),
Thongboonkerd V, MD, FRCPT (Proteomics, USA).
Wang H., BEng, MSc, PhD (Gene expression, UK)
Wu D BS, PhD (Bioinformatics and drug design, USA),
Yao J MSc, PhD (Plant genomics, USA ),
Zou M., MSc, PhD (Cancer Biology and Human Genetics, USA).
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ABSTRACT: In silico prediction of antigenic epitope of coat protein from soybean dwarf virus.
Gomase VS, Chikhale NJ., Onl J Bioinform., 1 (19):41-46, 2018.
FULL-TEXT IP Access [WORD] [PDF]
ABSTRACT: State of the art sensor-based wearables and nanorobotics for Life Sciences.
Bakopoulos E, Papageorgiou L, Megalooikonomou V, Vlachakis D., Onl J Bioinform., 1 (19):35-40, 2018
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ABSTRACT: Characterization and statistical analysis of gene expression on human X–chromosome, Xq22.1.
Niranjan V, Tamilzharasi V, Rahiman BA , Mohomood R, Kangesan P., Onl J Bioinform., 1 (19):25–34, 2018.
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ABSTRACT:
GC dispersion in non-coding RNAs from E. coli K12 genome.
Sridhar J,
Rafi ZA., Onl J Bioinform 1 (19):20–24, 2018.
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ABSTRACT:
Fomecin –A antiviral for NS3-4A of Hepatitis C virus.
Shanmugam R, Mani K, Vijay Kumar B., Onl J Bioinform., 19 (1):13-19, 2018.
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ABSTRACT:
Detecting domain boundaries in proteins by plotting of energy of
non-bonded interactions as function of In silico chain truncation
in native structural format.
Guptasarma P., Onl J Bioinform, 19 (1):1-12, 2018.
Authors: This journal requires raw data and program files for analysis.
FULL-TEXT IP Access [WORD] [PDF]
ABSTRACT:
Subtractive genomics for membrane drug targets for antibiotic resistant
Chlamydia trachomatis A/HAR-13,
Vijayakumari SM, Shivkumar M, Biplab B, Keshava M, Jhinuk C., Onl J
bioinform., 18(3):119-125, 2017.
FULL-TEXT IP Access [WORD] [PDF]
ABSTRACT:
In silico T-Cell Bacillus anthracis epitope protective
antigen - lethal factors.
Nayarisseri
AS, Ahmed SS, Yadav MD, Sahu J, Gupta P, Chourasia R, Mittal DR., Onl
J Bioinform,
18(3):108-118, 2017.
FULL-TEXT IP Access [WORD] [PDF]
ABSTRACT:
Calculating binding free energies and docking scores with PI3K inhibitors.
Shrivastava A, Durga Prasad K, Giri A., Onl J Bioinform., 18(3):101-107,
2017.
FULL-TEXT IP Access [WORD] [PDF]
ABSTRACT:
In silico drug design for methylene-tetrahydrofolate reductase.
Ram G., Onl J Bioinform., 18 (3): 86-100, 2018.
Authors: This journal requires raw data and program files for analysis.
FULL-TEXT IP Access [WORD] [PDF]
ABSTRACT:
Pathway analysis of sequences in Mycobacterium Tuberculosis and
Leprae.
Pillai L, Chouhan U., Onl J Bioinform.,
18(2):78-85, 2017
FULL-TEXT IP Access [WORD] [PDF]
ABSTRACT:
In silico prediction for Staphylococcus aureus vaccine
epitopes.
Garima Bajetha S, Anil Rai., Onl J Bioinform.,
18(2):68-77, 2017.
FULL-TEXT IP Access [WORD] [PDF]
ABSTRACT:
In silico epitope for malaria protein subunit vaccines.
Premnath D,
Indiraleka M., Onl J Bioinform.,
18(2):58-67, 2017.
FULL-TEXT IP Access [WORD] [PDF]
ABSTRACT:
Machine learning models for evaluation of domain based classification of
AIDS HIV-1 groups.
Dubey
FULL-TEXT IP Access [[WORD] [PDF]
ABSTRACT:
Docking alpha glucosidase (Homo sapiens) with Pterocarpus
santalinus linn (red sandalwood) for management of diabetes mellitus.
Challa CS1., Bulle S, Reddy VD., Nayakanti D, Nallanchakravarthula V.,
Onl J Bioinform., 18(2):47-52,
2017.
Authors: This journal requires raw data and program files for analysis.
FULL-TEXT IP Access [WORD] [PDF]
ABSTRACT:
Model docking human indoleamine 2,3 dioxygenase for prevention of cataract.
FULL-TEXT IP Access [WORD] [PDF]
ABSTRACT:
In silico docking hydrazone derivative with Sortase A from
Staphylococcus aureus.
FULL-TEXT IP Access [WORD] [PDF]
ABSTRACT:
Homology docking model for histone deacetylase 8.
Moghaddas AM., Onl J Bioinform., 18(1):19-29, 2017
FULL-TEXT IP Access[WORD] [PDF]
ABSTRACT:
Computational identification of inhibitors of PGES-1 in rheumatoid arthritis
by virtual screening and molecular docking.
Kumar P, Mishra N., Onl J Bioinform., 18(1):7-18, 2017.
FULL-TEXT IP Access [WORD] [PDF]
ABSTRACT:
In-Silico human, cow and sheep milk alpha casein S1, fibronectin,
lactoferrin and lysozyme for prediction of hypersensitivity and malnutrition
in infants
Pandey J, Sharma S., Onl J Bioinform., 18(1):1-6, 2017.
Authors: This journal requires raw data and program files for analysis.
FULL-TEXT IP Access [WORD] [PDF]
ABSTRACT:
In Silico model and chromosomal location of TaPHT1;1 high-affinity
phosphate transporter gene in wheat
(Triticum aestivum L.).
Kumar A, Rathore M, Singh
KP, Tyagi PK, Sharma N., . Onl J Bioinform., 17(3):180-191, 2016
FULL-TEXT IP Access [WORD] [PDF]
ABSTRACT:
Review:Molecular modeling computer aided drug design.
Singh N, Upadhyay S, Jaiswar
A, Tripathi A, Mishra N., Onl J Bioinform., 17(3):168-179, 2016.
FULL-TEXT IP Access [WORD] [PDF]
ABSTRACT:
Homology modeling and molecular dynamic ABC transporter1 anti-bacterial in
Antheraea mylitta.
Madipelli K, Rao PN., Onl J Bioinform., 17(3):159-167, 2016.
Authors: This journal requires raw data and program files for analysis.
FULL-TEXT IP Access [WORD] [PDF]
ABSTRACT:
In silico binding and
inhibition of Sortase A methicillin resistant
Staphylococcus aureus.
Souri S, Sharma AK, Sharma G., Onl J Bioinform., 17(2):148-158, 2016.
FULL-TEXT IP Access [WORD] [PDF]
ABSTRACT:
Molecular cloning and In-silico analysis of pectin lyase from
Aspergillus niger MTCC 404
Dubey AK, Yadav S, Anand G, Singh VK, Yadav D., Onl J Bioinform.,
17(2):136-147, 2016.
FULL-TEXT IP Access [WORD] [PDF]
Abirami M, Kannabiran K., Onl J Bioinform, 17(2):129-135, 2016.
FULL-TEXT IP Access [WORD] [PDF]
ABSTRACT: Molecular docking of indolizine heterocyclics.
Murali Krishna K, Lekha P, Raman PK, Raveendra Reddy P., Onl J
Bioinform., 17(2):116-128, 2016
FULL-TEXT IP Access [WORD] [PDF]
ABSTRACT: Molecular docking imidazo[1,2-b]pyridazine on methicillin resistant Staphylococcus aureus.
Raman PK, Murali Krishna K, Ramana PV*., Onl J Bioinform.,
17(2):105-115, 2016.
FULL-TEXT IP Access [WORD] [PDF]
ABSTRACT: In silico docking of curcumin inhibitor with α-Glucosidase in type 2 diabetes.
Tarigopula SP., Onl J Bioinform., 17(2):96-104, 2016.
FULL-TEXT IP Access [WORD] [PDF]
ABSTRACT: In silico dock-binding for anti-cancer oxadiazole derivatives.
Vijay JT, Babu KV, Uma A., Onl J Bioinform, 17(2):80-95, 2016.
Authors: This journal requires raw data and program files for analysis.
FULL-TEXT IP Access [WORD] [PDF]
ABSTRACT: Carragheen (Chondrus crispus) seaweed molecular marker database (CaMM-Db).
Bhati J, Sahu TK, Pande PK., , Onl J Bioinform., 17(1):69-79, 2016
FULL-TEXT IP Access [WORD] [PDF]
ABSTRACT: In silico modelling-docking diazepin derivatives.
Pyde AN., Onl J Bioinform., 17(1):53-68, 2016
FULL-TEXT IP Access [WORD] [PDF]
ABSTRACT: Homology modelling and structure for Neplanocin A derivatives.
Urama DC, Tarigopula SP, Pasha KM, Daddam JR., , Onl J Bioinform.,
17(1):41-52, 2016.
FULL-TEXT IP Access [WORD] [PDF]
ABSTRACT: In silico agonist for human extracellular superoxide dismutase SOD.
Hema K, Swargam S, Pradeep N, Umamaheswari A., Onl J Bioinform.,
17(1):29-40, 2016.
FULL-TEXT IP Access [WORD] [PDF]
ABSTRACT: In silico 3D structure of pectin lyase protein of Aspergillus flavus NRRL 3357.
Dubey AK, Yadav S, Tanveer A, Anand G Singh VK, Yadav D. Pectin.,
Onl J Bioinform., 17(1):13-28, 2016
FULL-TEXT IP Access [WORD] [PDF]
ABSTRACT: Structure based drug design targets for severe acute respiratory syndrome (sars) coronavirus.
Kumar V, Goswami S, Namdeo R, Jain R., Onl J Bioinform., 17(1):1-12,
2016.
Authors: This journal requires raw data and program files for analysis.
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ABSTRACT: Machine learning classification for HIV biomarkers.
Dubey
A, Onl J Bioinform.,
16(3): 344-356, 2015.
Submitted
Oct 23, Rev Oct 31, Publish Nov 9.
Review Report,
Raw Data (Y in Text)
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Das
I, Mishra H, Khodiar PK, Patra PK., Gene expression in sickle cell patients, Onl J Bioinform.,
16(3): 327-343, 2015.
Pt.
J.N.M. Medical College, Raipur, Surguja University, Ambikapur, Sickle Cell
Institute Chattisgarh, Raipur, India.
Submitted
Oct 14, Rev Oct 17, Publish Oct 20.
Review Report,
Raw Data (Y in Text)
FULL-TEXT IP Access [WORD] [PDF] Username/Password [WORD] [PDF]
ABSTRACT: Model simulation phylogenetics of erythropoietin expressed from cho cell line.
Mettaa
MK, Tantravahib S, Daddam JR.,
Onl
J Bioinform.,
16(3): 318-326, 2015.
Department(s)
of Biotechnology, GIS, GITAM University, Gandhi Nagar, Rushikonda,
Visakhapatnam, Andhra Pradesh, Jawaharlal Nehru Technological University,
Anantapur, Ananthapuram, Andhra Pradesh, India.
Submitted
Oct 3, Rev Oct 12, Publish Oct 17.
Review Report,
Raw Data (Y in Text)
FULL-TEXT IP Access [WORD] [PDF] Username/Password [WORD] [PDF]
ABSTRACT: In silico analysis of arsenate reductase gene in biological systems.
Tiwari
S, Sarangi BK, Nasim J, Yadav D., Onl J Bioinform.,
16(3): 303-317, 2015.
National
Environmental Engineering Research Institute, Council of Scientific and
Industrial Research, Nehru Marg, Nagpur, Department of Biotechnology, DDU
Gorakhpur University, Gorakhpur, Uttar Pradesh, India.
Submitted
Sep 17, Rev Oct 3, Publish Oct 15.
Review Report,
Raw Data (Y in Text)
FULL-TEXT IP Access [WORD] [PDF] Username/Password [WORD] [PDF]
ABSTRACT: Model protein docking l-glutaminase for anti-cancer activity.
Vijay Jesuraj SA, Jeya Praya SM, Ravikumar M., Onl J Bioinform.,
16(3): 293-302, 2015
Centre
for Pharmaceutical Sciences, JNT University, Kukatpally, Hyderabad 500 085,
Telengana State, Faculty of Pharmacy, Lincoln University College, 47301 Petaling
Jaya, Malaysia. Faculty of Pharmacy, Geethanjali College of Pharmacy, Cheerial, Keesara, Telengana, India.
Submitted
Sep 8, Rev Sep 28 Publish Oct 1.
Review Report,
Raw Data (Y in Text)
FULL-TEXT IP Access [WORD] [PDF] Username/Password [WORD] [PDF]
ABSTRACT: Molecular modelling-docking cell surface receptor CD10 target for doxorubicin.
Mishra
D, Singh VK, Singh S, Narayan G, , Onl J Bioinform.,
16 (3): 286-292, 2015.
Department
of Molecular and Human Genetics; Centre for Bioinformatics, School of
Biotechnology, Department of Zoology, Cancer Genetics Laboratory, Department of
Molecular and Human Genetics,
Banaras Hindu University, Varanasi , India.
Submitted
Aug 16, Rev Sep 28, Publish Sep 18.
Review Report,
Raw Data (Y in Text)
FULL-TEXT IP Access [WORD] [PDF] Username/Password [WORD] [PDF]
ABSTRACT: 3D QSAR, CoMFA and CoMSIA In silico docking of natural flavonoid cancer inhibitors.
Kumar
Gunda S., Onl J Bioinform.,
16 (3): 263-285, 2015.
Bio-Informatics
Division, Osmania University, Hyderabad, Telangana State, India.
Submitted
Aug 28, Rev Serp 2, Publish Sep 10.
Review Report,
Raw Data (Y in Text)
FULL-TEXT [WORD] [PDF] Username/Password [WORD] [PDF]
ABSTRACT: Review:Genome-wide copy number variation from next generation sequencing data.
Loukatou
S, Chatzinikolaou P, Vlachakis D, Kossida S., Onl J Bioinform.,
16 (2): 254-262, 2015.
Computational
Biology & Medicine Group, Biomedical Research Foundation, Academy of Athens,
Computer Engineering and Informatics Department, University of Patras,
Bionetwork ltd., Chalandri, Athens, Greece
Submitted
Jul 24, Rev Aug 13, Publish Aug 20.
Review Report,
Raw Data (Y in Text)
FULL-TEXT [WORD] [PDF] Username/Password [WORD] [PDF]
ABSTRACT: Integrating eHealth in HIV/AIDs intervention programmes in Nigeria,
Taiwo
OS., Onl J Bioinform.,
16 (2): 247-253, 2015.
Department
of Mathematics, Federal Government College, Nigeria
Submitted
Jul 27, Rev Aug 10, Publish Aug 16.
Review Report,
Raw Data (Y in Text)
FULL-TEXT [WORD] [PDF] Username/Password [WORD] [PDF]
ABSTRACT: Biclustering of tuberculosis microarray data.
Pradhan
S, Verma CK., Onl J Bioinform.,
16 (2): 226-246, 2015
Department
of Mathematics, Bioinformatics and Computer Applications, Maulana Azad National
Institute of Technology, Bhopal, India
Submitted
Jul 12, Rev Aug 9, Publish Aug 15.
Review Report,
Raw Data (Y in Text)
FULL-TEXT [WORD] [PDF] Username/Password [WORD] [PDF]
ABSTRACT: Anti-tubercular activity and molecular docking of dihydro-pyrimidinone derivatives.
Beda
PD, Vedula SG, Daddam JR., Onl J Bioinform.,
16
(2): 202-225, 2015.
Department
of Pharmaceutical Chemistry, Bhaskar Pharmacy College, Yenkapally, Moinabad,
Rangareddy, Telangana, Department of Pharmaceutical Chemistry, College of
Pharmaceutical Sciences, Andhra University, Vishakapatnam, Andhra Pradesh, Department of Biotechnology, JNTUA, Ananthapuram, Andhra
Pradesh, India.
Submitted
Aug 2, Rev Aug 8, Publish Aug 15.
Review Report,
Raw Data (Y in Text)
FULL-TEXT [WORD] [PDF] Username/Password [WORD] [PDF]
ABSTRACT: Respiratory gating for lung cancer radiotherapy.
KonstantaraK,
Danelakis A, Tzogogianni D, Polychronidou E, Venieris G, Papageorgiou L, Vlachakis
D., Onl J Bioinform., 16
(2): 194-201, 2015.
Computational Biology & Medicine Group, Biomedical
Research Foundation, Academy of Athens, Soranou Efessiou, Athens, Department of
Physics, National and Kapodistrian University of Athens, University Campus,
Athens, Department of Informatics and Telecommunications, National and Kapodistrian University of
Athens, University Campus, Athens, Department of Informatics, Ionian University,
Tsirigoti Square, Corfu, Nuclear Medicine Department, Diagnosis, 166 Alexandras Avenue, Ampelokipoi, Athens, Greece.
Submitted
Jul 24, Rev Jul 22, Publish Aug 6.
Review Report,
Raw Data (Y in Text)
FULL-TEXT [WORD] [PDF] Username/Password [WORD] [PDF]
ABSTRACT: Predicting evolution of colored vision in mammals through systems biology.
Sharma
S, Saxena P., Onl J Bioinform.,
16 (2): 188-193, 2015.
Life
Sciences, Institute of Applied Medicine and Research, Duhai, Ghaziabad, Uttar
Pradesh, Bioinformatics, Sathyabama University, Chenna, Tamilnadu, India.
Submitted
Nov 3, Rev Jul 12, Publish Jul 19.
Review Report,
Raw Data (Y in Text)
FULL-TEXT [WORD] [PDF] Username/Password [WORD] [PDF]
ABSTRACT: Antibacterial activity and molecular docking in Musa paradisiaca (Banana) flavonoids.
Sree
J, Gunda SK., Onl J Bioinform.,
16 (2): 179-187, 2015
University College of Science, Bioinformatics
Division, Osmania University, Hyderabad, Telangana State, India
Submitted
Jul 3, Rev Jul 10, Publish Jul 17.
Review Report,
Raw Data (Y in Text)
FULL-TEXT [WORD] [PDF] Username/Password [WORD] [PDF]
ABSTRACT: In Silico 2, 5- disubstituted-1, 3, 4-oxadiazole antibacterial activity.
Nagarjun
PA, Rao PN., Onl J Bioinform.,
16 (2): 156-178, 2015.
Department(s) of Microbiology,
2Zoology,
Osmania University, Hyderabad, India
Submitted
May 19, Rev June 16, Publish Juk 2.
Review Report,
Raw Data (Y in Text)
FULL-TEXT [WORD] [PDF] Username/Password [WORD] [PDF]
ABSTRACT: In silico model simulation docking of tyrosine kinase inhibiting leukemia quinazolines.
Bathula R, Rani Satla S., , Onl J Bioinform., 16 (2): 144-155, 2015.
Centre for Pharmaceutical Sciences, Institute of
Science and Technology, JNTUH, Kukatpally, HYD-85. India
Submitted
May 12, Rev May 18, Publish May 29.
Review Report,
Raw Data (Y in Text)
FULL-TEXT [WORD] [PDF] Username/Password [WORD] [PDF]
ABSTRACT: Prioritizing In Silico drug targets in metabolic pathway of Laribacter hongkongensis.
Aslam Tayubi I., Onl J Bioinform., 16 (2): 129-143, 2015
Faculty of Computing and Information Technology,
King Abdulaziz University, Rabigh, Saudi Arabia.
Submitted
May 3, Rev May 5, Publish May 12.
Review Report,
Raw Data (Y in Text)
FULL-TEXT [WORD] [PDF] Username/Password [WORD] [PDF]
ABSTRACT: In Silico inhibitors for PTP1B as a drug target for diabetes.
Galande
S, Ambhore S, Jena L, Kumar S., Onl J Bioinform,
16 (2): 121-128, 2015
Biochemistry & Bioinformatics Centre,
Mahatma Gandhi Institute of Medical Sciences, Sevagram(Wardha), Maharashtra,
India.
Submitted
May 3, Rev May 5, Publish May 12.
Review Report,
Raw Data (Y in Text)
FULL-TEXT [WORD] [PDF] Username/Password [WORD] [PDF]
ABSTRACT: In silico model design for GPI12 anchored protein,
Bhagyasri
RG, Chandrasekhar KB, Muralidhara RD., IOnl J Bioinform.,
16 (2): 109-120, 2015
Department of Chemistry, Jawaharlal
Nehru Technological University, Anantapur, Department of Biotechnology, Sri
krishnadevaraya University, Anantapur, India
Submitted
Apr 10, Rev May 2, Publish May 12.
Review Report,
Raw Data (Y in Text)
Authors: This journal requires raw data and program files for analysis.
ABSTRACT: In silico binding of Piper longum plant anti-diabetic derivatives with alpha glucosidase.
Sharmila UV, Sharma AR, Sharma G., Onl J Bioinform, 16 (1): 98-108,
2015
Department of Pharmacology,
Microbiology Suresh Gyan Vihar
University, Pharmacology., Arya College of Pharmacy, Kukas, Jaipur, Rajasthan,
India.
Submitted
Apr 9, Rev Apr 13, Publish Apr20.
Review Report,
Raw Data (Y in Text)
ABSTRACT: In silico docking of meliantrol, β-sitosterol, curcumin, vanillic and syringic acids to penicillin binding protein 2a on methicillin resistant Staphylococcus aureus.
Masroor
H, Parvateesam M, Daddam JR, Naidu NV., I Onl J Bioinform.,
16 (1): 88-97, 2015
Global Institute of Biotechnology,
Sai Triveni Chambers, Department of Biotechnology, Akshaya Biological
Corporation, Himayath Nagar, Hyderabad, India.
Submitted
Feb 21, Rev Feb 26, Publish Mar 12.
Review Report,
Raw Data (Y in Text)
ABSTRACT: Molecular modeling and in-silico characterization of Alkaline Protease from Bacillus circulans MTCC 7906.
Sharma
AD, Kaur GRI, Kocher S1, Onl J Bioinform.,
16 (1): 61-87, 2015
Department of Biotechnology, Lyallpur Khalsa College, G T Road, Jallandhar,
Punjab, Dept of Microbiology, Punjab Agricultural University (PAU),
Ludhiana, Punjab, India
Submitted
Nov 12, Rev Feb 12, Publish Feb 23.
Review Report,
Raw Data (Y in Text)
ABSTRACT: Biological databases as key for data integration, analysis and visualization.
Polychronidou
E, Vlachakis D, Papageorgiou L, Vlamos P., , Onl J Bioinform.,
16 (1): 51-60, 2015.
Department of Informatics, Ionian University,
Greece, Bioinformatics & Medical Informatics Team, Biomedical Research
Foundation, Academy of Athens, Soranou Efessiou 4, Athens 11527, Greece
Submitted Feb 3, Rev Feb 12, Publish Feb 17.
Review Report,
Data NR
ABSTRACT: Support vector machine to predict human death domain protein-protein interactions.
Nemade
PA, Pardasani KA., Onl J Bioinform.,
16 (1): 29-50, 2015.
Department
of Bioinformatics, Maulana Azad National Institute of Technology,
Department of Mathematics, Maulana Azad National Institute of Technology,
Bhopal, India
Submitted Jan 22, Rev Feb 2, Publish Feb 8.
Review Report,
Data NR
ABSTRACT: Characterization of mouse body insulin genes with genetic network systems.
Zeeshan A, VermaCK., Onl J Bioinform., 16 (1): 18-28, 2015.
Department of Mathematics,
Computer Applications and Bioinformatics, Maulana Azad National Institute of
Technology, Bhopal, India
Submitted Jan 11, Rev Jan 17, Publish Jan 25.
Review Report,
Data NR
ABSTRACT: Modelling simulation phylogenetics of leukemia FMS tyrosine kinase 3 (FLT3).
Kotha P, Rayalu Daddam J, Sai Gopal Divi VR, Dakinedi SR, Dowlathabad
M., Onl J Bioinfo.,
16 (1): 8-17, 2015
DST-PURSE, Sri Venkateswara University, Tirupati, Department of
Biotechnology, JNTUA, Anantapur, 4Department of Chemical Engineering, JNTUA
College of Engineering, Anantapur,
Department of Biotechnology, Sri
Krishnadevaraya University, Anantapur, A.P. India.
Submitted Jan 4, Rev Jan 12, Publish Jan 25.
Review Report,
Data NR
ABSTRACT: Systems biology prediction of evolutionary process for coloured vision in mammals.
Sharma S, Saxena P., Onl J Bioinform, 16 (1): 1-7, 2015.
Department of Life science, Institute of applied medicine and research,
Duhai, Ghaziabad, Uttar Pradesh. Department of Bioinformatics, Sathyabama
University, Chennai, Tamilnadu, India.
Submitted Dec 24, Rev Jan 2, Publish Jan 10. Review Report, Data NR
Re-annotation of hypothetical proteins of Geobacter sulfurreducens PCA by integrated computation,
Selvaraj A, Chinnasamy Perumal R, Chowdhary N, Kannan Kandavel P,
Radhakrishnan V, Kumar Gopal R., Onl J Bioinform.,
15 (3): 253-266, 2014.
Bioinformatics Lab, AU-KBC Research Centre, M.I.T Campus of Anna
University, Chromepet, Chennai 600044, India.
Submitted May 14, Rev Sep 10, Publish Sep 24.
Review Report,
Data NR
Data mining techniques for biological sequence classification
Dubey A., Onl J Bioinform.,
15 (3): 243-252, 2014
Department of Mathematics, Computer Applications and Bioinformatics,
Maulana Azad National Institute of Technology, Bhopal, India
Submitted May 14, Rev Sep 10, Publish Sep 24.
Review Report,
Data NR
Characterization of mouse insulin gene through genetic and network approaches.
Arif
Z, Verma CK., Onl J Bioinform.,
15 (3): 231-242, 2014.
Department of Mathematics, Computer Applications and Bioinformatics,
Maulana Azad National Institute of Technology, Bhopal, India
Submitted Aug 6, Rev Aug 23, Publish Sep 14.
Review Report,
Data NR
In silico drug design inhibitor for methylene-tetrahydrofolate reductase.
Ram G., Onl J Bioinform.,
15 (2): 218-230, 2014.
Department of Biotechnology & Bioinformatics, Lyallpur Khalsa
College, jalandhar, Punjab, India.
Submitted Jun 6, Rev Jun 7, Publish Jun 9.
Review Report,
Data NR
Mekala R, Verma CH., , Onl J Bioinform.,
15 (2): 210-217, 2014.
Department
of Mathematics & Computer Applications, Department of Mathematics & Computer
Applications, MANIT, Bhopal, India.
Submitted Jul 2, Rev Jul 12, Publish
Jul 26. Review Report, Data NR
In silico 17β-Hydroxysteroid dehydrogenase fungicide for leaf spot disease (Cercospora sp).
Singh
VK, Chand R, SinghBD., Onl J Bioinform., 15 (2): 198-209, 2014
Centre for Bioinformatics, Department of Mycology and Pathology, School of
Biotechnology, Banaras Hindu University, Varanasi- India.
Submitted Jun 25, Rev Jun 27,
Publish Jul 3. Review Report, Data NR
Structure of tumor suppressor gene protein (PTEN) by homology modelling.
Rathore B, Shakya M., Onl
J Bioinform.,
15 (2): 191-197, 2014.
Department(s) of Bioinformatics and Mathematics, MANIT, Bhopal- 462051,
India
Submitted Jun 8, Rev Jun 10, Publish
Jun 16. Review Report, Data NR
Tuhin
Ali M, Palit P, Hasan S., Onl J Bioinform.,
15 (2): 178-190, 2014
Department of Biochemistry & Molecular Biology, University of Dhaka,
Dhaka, Bangladesh, Bioinformatics Lab, QIMR Berghofer Medical Research
Institute, Brisbane, Queensland, Australia, School of Medicine, The
University of Queensland (UQ), Brisbane,
Queensland, Australia
Submitted Jun 6, Rev Jun 7, Publish Jun 9.
Review
Report,
Data
Y
Molecular dynamic differences between isoform specific and class I PI3K inhibitor.
Shrivastava
A, Prasad KD, Giri A., s, Onl J Bioinform., 15 (2): 168-177, 2014.
Natco Research Centre, B-13, Industrial estate, Sanath Nagar, Hyderabad,
Department of Biotechnology, JNTU, Kukatpally, Hyderabad, India
Submitted Apr 23, Rev May 22 Publish Jun7. Review Report, Data
Finite element model of calcium distribution in oocytes for one dimensional unsteady state case.
Ahmad
Naik P, Pardasani KR., Onl J Bioinform.,
15 (2): 157-167, 2014
Department of Mathematics, Maulana Azad National Institute of
Technology, Bhopal, India.
Submitted May 20, Rev May 28 Publish Jun 6. Review Report, Data
In silico inhibitors for human papillomavirus 16 E7 protein,
Kumar S,
Jena L, Mohod K, Daf S, Varma A., Onl J Bioinform.,
14 (3): 302-310, 2013.
Biochemistry
& Bioinformatics Centre, Mahatma Gandhi Institute of Medical Sciences,
Sevagram, Maharashtra, Datta Meghe Institute of Medical Sciences, Nagpur and
Advanced Centre for Treatment, Research &
Education in Cancer, Khargar, Navi Mumbai,
India
Submitted Oct 5 Rev Oct 24, Publish Oct 30.
Review Report,
Data
In silico inhibitors for falcipain-3 in Plasmodium falciparum.
Saddala MS, Gayathri P, Obaiah J,. Vallamma C. Usha Rani A., Onl J Bioinform.,
14 (3): 293-301, 2013.
Dept. of Zoology,
DBT-Bioinformatics Center, Sri Venkateswara University, Tirupati.
Submitted Sep 22 Rev Oct 13, Publish Oct 20. Review Report,
Data
Virtual dihydroxy acid dehydratase inhibitors for tuberculosis
Jena L, Kumar S., , Onl J
Bioinform., 14 (3): 282-292, 2013.
Bioinformatics
Centre & Biochemistry, Mahatma Gandhi Institute of Medical Sciences,
Sevagram, Maharashtra and Department of Bioinformatics, Shri JJT University,
Jhunjhunu, Rajasthan, India
Submitted Sep 2 Rev Oct 5, Publish Oct 14. Review Report,
Data
Homology modelling of laccase from white-rot fungus Schizophyllum commune.
Reddy GV, Vijaya CH, Venkateswarlu K., , Onl J Bioinform.,
Volume 14 (3): 274-281, 2013.
Department(s)
of Biotechnology
and
Marine
Biology, Vikrama Simhapuri University, Nellore , India
Submitted Sep 25 Rev Sep 30, Publish Oct 3.
Review Report,
Data
Prediction of crucial water
molecules during interaction of
curcumin and demethoxycurcumin at active sites of multiple target
proteins
Singh N, Butle A, Misra K., 13(3):418-431, 2012.
Division of Applied Sciences and
Indo Russian Centre for Biothechnology (IRCB), Indian institute of Information
Technology, Allahad, Centre for Biomedical Research, SGPGIMS campus, Lucknow,
India
Submitted May 25, Rev June, Publish Nov 12. Review Report,
Data
Patra MC, Rath SN, Bhoi GK, Pradhan SK., 13(2):360-374, 2012.
Department of Bioinformatics, Orissa University of Agriculture and Technology, Bhubaneswar, Orissa, India.
Submitted Aug 21, Rev Sept 21, Publish Oct 12, Review Report, Data
Nayak S, Umadevi K, Jagannath M., 13(2):331-359, 2012.
DBT – BIF Programme, Department of Marine Living Resources, Andhra University, Visakhapatnam AP, India,
Submitted Jun 3, Rev Sept 13, Publish Oct 8, Review Report, Data
Zaman A., 13(2):314-330, 2012.
Molecular Biology Laboratory, Department of Biochemistry and Molecular Biology and Department of Genetic engineering and Biotechnology, University of Dhaka, Bangladesh.
Submitted Aug 10, Rev Sept 3, Publish Sep 28, Review Report, Data
Mujwar S, Pardasani KR., 13(2):285-313, 2012.
Department of Mathematics, MANIT Bhopal, India
Submitted Aug 14, Rev Aug 24, Publish Sep 22. Review Report, Data
Dubey A, Chouhan U., 13(2):274-284, 2012.
Department(s) of Bioinformatics and Mathematics, MANIT, BHOPAL (M.P)
Submitted Jul 6, Rev Aug 22, Publish Sep 18. Review Report, Data
Bhaskar BV, Munichandrababu T, Bhuvaneswar C, Rajendra W., 13(2):260-273, 2012.
DBT-Bioinformatics Center, Department of Zoology, Sri Venkateswara University, Tirupati.
Submitted Aug 16, Rev Aug 20, Publish Sep 16. Review Report, Data
FULL TEXT [WORD]
[PDF]
Dubey AK, Yadav S, Rajput R, Anand G, Yadav D. 13(2):246-259, 2012.
Department of
Biotechnology, D.D.U Gorakhpur University, Gorakhpur, Mahila Mahavidyalaya,
Banaras Hindu University, Varanasi, Uttar Pradesh India., Corresponding author:
Australian Centre for Plant
Functional Genomics, University of Adelaide, Glen Osmond, South Australia 5064,
Australia.
Submitted Aug 12, Rev Aug 18, Publish Sep 12. Review Report, Data
Yadav SS, SinghVK, Liebau E, Rathaur S., 13(2):232-245, 2012.
Department of Biochemistry, Centre for Bioinformatics, Faculty of Science, Banaras Hindu University, Varanasi, India and Westfalische Wilhelms-Uinversitat, Institute of Animal Physiology, Department of Molecular
Physiology, Hindenburgplatz-55, Muenster, Germany.
Submitted Aug 10, Rev Aug 15, Publish Sep 2. Review Report, Data
Navya P, Hema K, Munikumar M, Swargam S, Umamaheswari A., 13(2):222-231, 2012.
SVIMS Bioinformatics Centre, Department of Bioinformatics, SVIMS University, Tirupati - India.
Submitted Jun 14, Rev Jul 25, Publish Aug 12. Review Report, Data
Shree T, Banerjee S, Srivastava S., 13(2):214-221, 2012.
Institute of Computational Biology, Domlur Layout, Bangalore, Amity University Campus, Malhaur, Lucknow, Uttar Pradesh, India.
Submitted Jul 16, Rev Jul 16, Publish Aug 2. Review Report, Data
Kumari T, Pardasani KR., 13(2):202-213, 2012.
Department of Bioinformatics. MANIT, Bhopal, India
Submitted Jun 26, Rev Jul 14, Publish Jul 29. Review Report, Data
Sivan A, Antony S, Reegan AD., 13(2):192-201, 2012.
Regional Medical Research Institute, ICMR, Port Blair and Division of bioinformatics, Entomology Research Institute, Loyola College, Chennai, India.
Submitted Jun 21, Rev Jun 28, Publish Jul 19. Review Report, Data
Dwivedi VD, Mishra SK., 13(2):184-191, 2012.
Department of Bioinformatics, UCST, Dehradun and Department of Biotechnology, DDU University, Gorakhpur. India
Submitted Apr 17, Rev Jun 18, Publish Jul 17. Review Report, Data
Kulkarni P, Devarumath RM.,
13(1):167-183,
2012.
Molecular Biology & Genetic Engineering Division, Vasantdada Sugar Institute, Manjari (Bk), Tal. Haveli and Department of Biotechnology, University of Pune, Maharashtra, India
Submitted June 11, Rev Jun13, Publish Jul 12. Review Report, Data
Yadav V, Yadav KDS.,
13(1):156-166,
2012.
Department of Chemistry, Deen Dayal Upadhyaya Gorakhpur University, Gorakhpur. India
Submitted Apr 14, Rev Jun3, Publish Jun 28. Review Report, Data
Ramole S, Chouhan U.,
13(1):144-155, 2012.
Department(s) of Bioinformatics and Mathematics, MANIT, Bhopal MP, India
Submitted Mar 26, Rev May 18, Publish Jun 12, Review Report, Data
Shree T, Asnet JM, Kumar R, Mohan T, Shenbagarathai R., 13 (1):130-143,
2012
PG and Reserach Department of Zoology and Biotechnology, Lady Doak College, Narimedu, Madurai, Tamilnadu, Institute of Computational Biology, Bangalore, Schrödinger,
Bangalore and Department of Biotechnology, New Delhi, India.
Submitted Apr 16, Rev May 10, Publish May 28, Review Report, Data
Sarika
M, Iquebal A, Rai A., 13 (1):120-129, 2012
Centre for Agricultural Bioinformatics, Division of Biometrics and Statistical Modelling, Indian Agricultural Statistics Research Institute, PUSA, New Delhi, India.
Submitted Feb 18, Rev May 3, Publish May 21 Review Report, Data
Sangeetha
K, Babu RO, Eapen SJ.,
13(1):103-119, 2012
Bioinformatics Center, Division of crop protection, Indian Institute of Spices Research, Calicut, Kerala, India.
Submitted Mar 26, Rev May 3, Publish May 18, Review Report, Data
Hemanthkumar
M, Umamaheswari A.,
13(1):93-102,
2012
Agricultural Research Station, ANGR Agricultural University, Perumallapalle, SVIMS Bioinformatics Centre, Department of Bioinformatics, SVIMS University, Tirupati.
Submitted Jan 23, Rev Apr 4, Publish April 30, Review Report, Data
Dubey AK, Yadav S, Anand G, Bisht NC, Yadav D.,
13(1):80-92,
2012
Department of Biotechnology, D.D.U Gorakhpur
University, Gorakhpur (U.P.) National Institute of Plant Genome Research, JNU
Campus, New Delhi,India.
Submitted Dec11, Rev Jan 28, Publish March 28, Review Report, Data
Yadav
SS, Singh VK, Liebau E, Rathaur S.,
13(1):59-79,
2012
Centre for Bioinformatics, Faculty of Science,
Banaras Hindu University, Varanasi, India and Westfalische Wilhelms-Uinversitat,
Institute of Animal Physiology, Department of Molecular Physiology,
Hindenburgplatz-55, Muenster,
Germany.
Submitted Mar 12, Rev Mar 14, Publish March 28, Review Report,
Data
IKaur J,
Mohan A, Kumar S, Pallavi A, Malakar K.,
13(1):50-58, 2012
BCS In silico Biology,
National Bureau of Fish Genetic Resources, Lucknow U. P., India.
Submitted Feb 28, Rev Mar 4, Publish March 18, Review Report,
Data
Idrus S,
Tambunan USF., 13(1):41-49, 2012
Departement of
Chemistry, Faculty of Mathematics and Science, University of Indonesia,
Depok 16424 Indonesia.
Submitted Nov 18, Rev Feb 12, Publish Feb 28, Review Report,
Data
Karthik
MVK, Syed H, Goswami T, Shukla P.,
13(1):33-40, 2012
Birla Institute of
Technology, Mesra, Jharkhand, India.
Submitted No 18, Rev Feb 12, Publish Feb 28, Review Report,
Data
In silico
analysis of bacterial DNA polymerases and molecular
phylogeny.
Sridhar
M, Manjunath A, Bala Chauhan J, Zameer F.,
13(1):27-32, 2012
Department of Biotechnology and
Microbiology, Mahajana Life Science Research Centre, Pooja Bhagavat Memorial
Mahajana Post Graduate Centre, K.R.S Road, Metagalli, Mysore,. Karnataka,
India.
Submitted Dec 15, Rev Jan 13, Publish Feb 8, Review Report,
Data
In silico
horizontal gene transfer and functional motif in GshF protein of
Listeria
monocytogenes
Srinivas V, Kreft J,
Gopal S.,
13(1):14-26, 2012
Department of
Microbiology, University of Mysore, Manasagangotri, Mysore , Karnataka, Indian
and Department of Microbiology, Biocenter, University of Wuerzburg, 97074
Wuerzburg, Germany
Submitted Dec 15, Rev Jan 13, Publish Feb 8, Review Report, Data
Pradeepa
N, Shanmuga PP, Jebakumar Prince KS, Kavitha S, Poornima R, Prabhakar MS .
Chandra Babu R., 13(1):1-13, 2012
Department of Plant
Molecular Biology and Bioinformatics, Centre for Plant Molecular Biology and
biotechnology, Tamil Nadu Agricultural University, Coimbatore, India
Submitted Dec 8, Rev Dec 9, Publish Jan 2, Review Report, Data
In Silico substrate specificity in bmgt1 and bmgt2 genes of Bacopa monniera glycosyltransferases Alternative site
Sharma R, Ruby R, Khan
BM, Suresh CG.,
12(2):413-430, 2011
Division of Biochemical
Sciences and Plant Tissue Culture Division, National Chemical Laboratory, Pune,
India.
Submitted Sep 12, Rev Nov 1, Publish Dec 15, Review Report, Data
In Silico model of Homo sapiens Nectin-4: a novel anticancer drug target. Alternative site
Das D, Preet R,
Mohapatra P, Satapathy SR, Kundu CN.,
12(2):395-412, 2011
KIIT
School of Biotechnology, KIIT University, Campus-11, Patia, Bhubaneswar, Orissa,
India.
Submitted Jun 23, Rev Oct 13, Publish Nov 27, Review Report, Data
Prediction of 3D model of nuclear export protein of influenza A virus. Alternative site
Khewariya D., 12(2):386-393, 2011
Devi
Ahilya University Indore, India
Submitted Oct 16, Rev Oct 18, Publish Nov 27, Review Report, Data
Evaluation of the severity of asthma by using an artificial neural network Alternative site
Kumar A, Singh S,
Vennila JJ., 12(2):379-385,
2011
Department of Bioinformatics, Karunya University, Karunya
Nagar, Coimbatore, Tamil Nadu, India
Submitted Oct 27, Rev Oct 18, Publish Nov 23, Review Report,
Data
In silico T cell antigens from proteome of H1N2 swine influenza A virus Alternative site
Verma SK, Singh
Yadav SK, Kumar A., 12(2):371-378,
2011
Department of Biotechnology, Institute of Biomedical
Education and Research, Mangalayatan University, Aligarh (U.P),
India
Submitted Oct 17, Rev Oct 13, Publish Nov 13, Review Report,
Data
Singh
S, Kumar A, Vennila JJ., 12(2):357-370, 2011
Department of Bioinformatics, School of Biotechnology and
Health Sciences, Karunya University, Coimbatore, Tamil Nadu,
India.
Submitted Sep 12, Rev Oct 10, Publish Nov 3, Review Report,
Data
Patra
MC, Rath SN, Bhoi GK, Pradhan SK., 12(2):345-356, 2011
Department of Bioinformatics, Orissa University of
Agriculture and Technology, Bhubaneswar, Orissa, India
Submitted Oct 6, Rev Oct 10, Publish Oct 27, Review Report,
Data
Singh N, Mishra H, Misra K.,
12(2):329-344, 2011
Division of
Bioinformatics and allied sciences, Indian Institute of Information Technology,
Allahabad, India
Submitted Sep 4, Rev Sep 18, Publish Oct 27, Review Report, Data
Suresh E, Reddy AK, Krishna G, Chaudhari A, Sharma R, Babu PG., 12(2):323-328, 2011
Division of Fish Genetics and Biotechnology, Central Institute of Fisheries Education, Indian Council of Agricultural Research, Versova, Mumbai, India.
Submitted Aug 16, Rev Sep 18, Publish Oct 24, Review Report, Data
Umamaheswari A, Pradhan D, Priyadarshini V, Munikumar M, Rao S., 12(2):304-322, 2011
SVIMS Bioinformatics Centre, Department of Biochemistry SVIMS University, Tirupati, India
Submitted Jul 5, Rev Jul 15, Publish Sep 24, Review Report, Data
Kumar Verma S, Singh Yadav SP, Singh R, Kumar A.,
12(2):304-313,
2011
Department of Biotechnology, Institute of Biomedical Education and Research, Mangalayatan University, Aligarh, India.
Submitted Jun 3, Rev July 16, Publish Sept 3, Review Report, Data
Kumari
N, Singh VK, Narayan OP, Rai LC.,
12(2):289-303,
2011
Molecular Biology Section, Centre for Bioinformatics, Centre of Advanced Study in Botany, Banaras Hindu University, Varanasi, India.
Submitted Mar 23, Rev Jun 15, Publish August 27, Review Report, Data
Rajendran
B, Murugan V, Premnath K, Gomez P.,
12(2):274-288,
2011
Department of Bioinformatics, Karunya University, India.
Submitted Feb 3, Rev Jun 5, Review Report, Data
Jagannath M, Umadevi K,
Subhalaxmi N.,
12(2):255-273,
2011
DBT – BIF Programme, Department of Marine Living Resources, Andhra University, Visakhapatnam, India.
Submitted Jan 11, Rev Mar 15, Publish July 17 Review Report, Data
Jyoti
P, Vidyarthi AS, Shankaracharya M.,
12(2):243-254,
2011
Department of Biotechnology, Birla Institute of Technology, Mesra, Ranchi, India.
Submitted Feb 16, Rev Mar 8, Publish July 7 Review Report, Data
Mathur R, Adlakha
N.,
12(2):230-242, 2011
Department of Applied Mathematics & Humanities, Sardar Vallabhbhai National Institute of Technology, Surat, Gujarat, India.
Submitted Mar 12, Rev May 29, Publish July 3 Review Report, Data
Priyadarshini
V, Pradhan D, Munikumar M, Umamaheswari A.,
12(2):217-229,
2011
SVIMS Bioinformatics Centre, Department of Bioinformatics, SVIMS University, Tirupati, India.
Submitted Mar 11, Rev May 27, Publish July 3 Review Report, Data
Rathankar N, Nagendra
HG.,
12(2):207-216, 2011
School of Bioengineering, Department of Bioinformatics, SRM University, Kattankulathur campus, Hennai and Dept. of Biotechnology, Sir M. Visvesvaraya Institute of Technology, Krishnadevarayanagar, Unasamaranahalli,
Bangalore, India.
Submitted Feb 18, Rev Mar 12. Publish June 28 Review Report, Data File
Grover M, Kaur S.,
12(1):198-206, 2011
National Bureau of Plant Genetic Resources,
Pusa Campus, New Delhi , India
Submitted Mar 5, Rev May 12. Publish June 28
Review Report
Sahu TK, Rao
AR, Alka B, Behera BK, Mohapatra T.,
12(1):175-197,
2011
Indian
Agricultural Statistics Research Institute, New Delhi, Central Inland Fishery
Research Institute, Barrackpore, Kolkata, National Research Centre on Plant
Biotechnology, New Delhi, India
Submitted May 3, Rev May 12. Publish June 27
Review Report
Srividhya KV,
Krishnaswamy S.,
12(1):167-174, 2011
Centre of
Excellence in Bioinformatics, School of Biotechnology, Madurai Kamaraj
University, Madurai-625021, Tamilnadu, India
Submitted Mar 26, Rev May
6. Publish June 12 Review Report
Trivedi
N, Sarangi AN, Naik S, Aggarwal R.,
12(1):149-166, 2011
Biomedical Informatics Centre, School of Telemedicine and Biomedical Informatics, Sanjay Gandhi Postgraduate Institute of Medical Sciences, Lucknow, India
Submitted Oct 16, Rev May 8. Publish June 4 Review Report
Sahu
TK, Patra MC, Sarang AN.,
12(1):139-148, 2011
Indian Agricultural Statistics Research Institute, Institute of Genomics and Integrative Biology, New Delhi, and Sanjay Gandhi Post Graduate Institute of Medical Sciences, Lucknow, Uttar Pradesh, India.
Submitted Apr 16, Rev May 1. Publish May 28 Review Report
Uddin M,
Rahman AA.,
12(1):115-138,
2011
Department of Information Systems, Universiti Teknologi Malaysia Johor Malaysia.
Submitted Apr 20, Rev Apr 23. Review Report
Karthik
MVK, Shrivastava S, Shukla P.,
12(1):107-114, 2011
Birla Institute of Technology, Mesra, Ranchi, Jharkhand, India
Submitted Nov 15, Rev Feb 16, Publish May 17 Review Report
Potluri
V, Pradhan D, Umamaheswari A.,
12(1):98-106,
2011
SVIMS Bioinformatics Centre, Department of Bioinformatics, SVIMS University, Tirupati, India
Submitted Nov 15, Rev Feb 16, Publish May 17 Review Report
Amouda V,
Buvaneswari S, Kuppuswami S.,
12(1):74-84, 2011
Centre for Bioinformatics, Department of Computer Science R.V. Nagar, Kalapet, Pondicherry University, India
Submitted Nov 11, Rev Feb 16, Publish May 7 Review Report
Sunil Kumar BV,
Kataria M, Kumar R, Kumar KA, Vishwanatha Reddy AP.,
12(1):66-73,
2011
Enzymology lab., Division of Biochemistry, Indian Veterinary Research Institute, Izatnagar, Bareilly, India.
Submitted Apr 22, Rev Feb 15, Publish Apr 28 Review Report
FULL TEXT [WORD] [PDF] From Here!!!!
Kumar S,
Pathak J, Asha PJ, Bandopadhyay R.,
12(1):57-65, 2011
Department of Biotechnology, Birla Institute of Technology, Mesra, Ranchi, Jharkhand, India
Submitted Feb 12, Rev Feb 15, Publish Apr 27 Review Report
ABSTRACT
In silico epitope rabies
virus vaccine.
Tomar NR, Marla SS, Chandra R, Kumar R, Kumar A., 12 (1): 46-52, 2011.
Department(s) of Molecular Biology and Genetic Engineering, G.B.Pant university of Agriculture and Technology and Veterinary Microbiology, G. B. Pant University of Agriculture and Technology, Pantanagar-
Animal Biotechnology section, Central Sheep and Wool Research Institute, Avikanagar, India
Submitted Apr 3, Rev May 6, Dec 3, Publish Jan 8 Review Report
Radhika V, Reddy DCL, Bhardwaj A, Aswath C., 12 (1): 34-45, 2011.
Division of Biotechnology, Indian Institute of Horticultural Research, Hessaraghatta Lake, Bangalore , India.
Submitted Apr 3, Rev May 6, Dec 3, Publish Jan 8 Review Report
ABSTRACT
Comparative evolutionary
analysis of metallo-β-lactamases with reference to NDM1
Odedra D, Mallick M, Vidyarthi AS, Shankaracharya D., 12 (1): 18-33, 2011.
Department of Biotechnology, Birla Institute of Technology, Mesra, Ranchi, India
Submitted Nov 23, Rev Dec 12, Publish Feb 8 Review Report
ABSTRACT
Prediction of
mutagenicity of compounds by Support Vector Machine
Alternative
site
Sharma A, Kumar R, Varadwaj P., 12 (1): 9-17, 2011.
Department of Bioinformatics, Indian Institute of Information Technology Allahabad,Deoghat, Jhalwa, Allahabad, Amity Institute of Biotechnology (AIB), Amity University Uttar Pradesh, Lucknow, Uttar Pradesh, India
Submitted Sep 5, Rev Oct 8, , Publish Jan 7 Review Report
ABSTRACTSupport vector
machine classification and prediction of lyases.
Alternative
site
Lavanya Rishishwar L, Mishra N, Pant B, Pant K, Pardasani KR, 12 (1): 1-8, 2011.
Department of Bioinformatics, Maulana Azad National Institute of Technology, Bhopal, India
Submitted Oct 17 Rev May 6, Dec 3, Publish Jan 8 Review Report
Yassien MH, Obata M, Iman MK, Komaru A.,11 (2): 317-326, 2010..
National Institute of Oceanography and Fisheries and National Research Center, Egypt and Faculty of Bioresources, Mie University, Tsu City, Mie Prefecture, Japan.
Submitted Oct 3, Rev Oct 6, Review Report
Monika K, Muralidhara Rao D, Anuraj N, Yadav M, Nageswara Rao N, Venkateswarlu K., 11 (2): 302-316, 2010.
Department of Microbiology/Biotechnology, Sri Krishnadevaraya University, Bioinformatics Research Laboratory, Eminent Biosciences, Indore, Department of Chemistry, MVR College of Engineering and Technology, India.
Submitted Aug 24, Rev Sep 6, Publish Nov 3, Review Report
Yadav V, Yadav D, Singh Yadav KD., 11 (2): 293-301, 2010..
Department(s) of Chemistry and Biotechnology, DDU Gorakhpur University, Gorakhpur, India.
Submitted July 31, Rev Sep 6, Publish Nov 3, Review Report
Gaci O., 11 (2): 11 (2): 282-292, 2010..
Le Havre University, Le Havre – France
Submitted Dec 21, Rev Aug 9, Review Report
Agarwal SM, Raghav D, Kumar A., 11 (2): 11 (2): 265-281, 2010..
Bioinformatics Division, Institute of Cytology and
Preventive Oncology, Uttar Pradesh,
India
Submitted Jun
28, Rev Sep 4, Publish Oct 23
Review
Report
Ampe
M, Verbeke G, Vanneste E, Vermeesch JR.,
11 (2):
244-264, 2010.
Interuniversity Institute for Biostatistics and
statistical Bioinformatics, Katholieke Universiteit Leuven and Universiteit
Hasselt and, Centre for Human Genetics (CME), Katholieke Universiteit Leuven,
Belgium
Submitted
Jul 16, Rev Jul 18, Publish Aug 24 Review
Report
FULL TEXT [WORD]
[PDF]
Centre for Chemical Biology and Biology Division, Indian
Institute of Chemical Technology (IICT), and Functional Genomics and Gene
Silencing Group, Centre for Cellular and Molecular Biology (CCMB), Hyderabad,
India. and NRES,
Department of Natural Resources and Environmental Sciences.
Alabama A & M University, Normal,
USA.
Submitted May 17, Rev April 15, Publish July 7 Review Report
ABSTRACT
XML storage model preserving
relational integrity constants and complex
typesKasri LA, Chenfour N., 11 (2): 217-223, 2010.
Laboratoire Inf LAormatique et Nouvelles
Technologies de l’information, University Sidi Mohamed Ben Abdellah (USMBA) Fez
Morocco, , Faculté des Sciences Dhar el mehraz Fez
Morocco.
Submitted
May 17, Rev April 15, Publish July 7 Review Report
Lecca P, Palmisano A.,
11 (2): 177-216,
2010.
The Microsoft Research - University of Trento Centre for
Computational and Systems Biology, 38123 Povo (Trento), Italy
Submitted April 10, Rev April 12, Publish May 25 Review
Report
Baticados WN, Inoue N,
Sugimoto C, Nagasawa H, Baticados AM.,
11 (1): 155-,
2010.
College of Veterinary Medicine,University of the Philippines Los Baños, Laguna; National Research Center for Protozoan Diseases, Obihiro University of Agriculture and Veterinary Medicine, Obihiro, Hokkaido 8555,
Japan and Laboratory of Infectious Diseases, Graduate School of
Veterinary Medicine, Hokkaido University, Sapporo 060-0818,
Japan.
Submitted April 10, Rev April
12, Publish May 25 Review Report
Anyiawung FC, Verbeke G Valkenborg D, Zhao H, Marchal K, Engelen K., 11 (1): 145-, 2010.
Interuniversity Institute for Biostatistics and statistical Bioinformatics, Katholieke Universiteit Leuven, Kapucijnenvoer 35, Blok D, bus 7001, B3000 Leuven, Interuniversity Institute for Biostatistics and statistical
Bioinformatics,Universiteit Hasselt, Agoralaan 1, B3590 Diepenbeek, Department of Microbial and Molecular Systems, Katholieke Universiteit Leuven, Leuven, Flemish Institute for Technological Research (VITO),
Boeretang 200, B2400, Mol, Belgium.
Submitted April 4, Rev April
6, Publish May 15 Review Report
Tobak A, Arora S, Welsh WJ., 11 (1): 128-144, 2010.
Department of Pharmacology, University of Medicine & Dentistry of New Jersey-Robert Wood Johnson Medical School (UMDNJ-WJMS) & Informatics Institute of UMDNJ, Piscataway and 2 NJ Center for Science,
Technology and
Mathematics, Kean University, Union, NJ 07083, USA.
Submitted March 28, Rev April
3, Publish May 7 Review Report
Lin D, Shkedy Z, Molenberghs G, Talloen W, Goelhmann HWH, Bijnens L., 11 (1): 106-127, 2010.
BioStat,
Universiteit Hasselt and Katholieke Universiteit Leuven, Janssen, Beerse,
Belgium.
Submitted March 28, Rev April
3, Publish May 3
Review
Report
Rajadurai CP, Kumar GP., 11 (1): 90-105, 2010.
Bioinformatics
Lab, AU-KBC Research Centre, MIT Campus, Anna University Chennai, Chromepet,
Chennai 600 044.India.
Submitted Nov 13, Rev Feb
20, Publish Apr 5 Review Report
Ravichandran S, Jeyakumar N., 11 (1): 83-89, 2010.
Data
Mining and Text Mining Laboratory, Department of Bioinformatics, Bharathiar
University, Coimbatore, India.
Submitted Dec 17, Rev Feb 2,
Publish Apr 2 Review Report
Chouhan U, Pasandi
KR.,
11 (1): 72-82,
2010.
Department of
Mathematics,MANIT, Bhopal, India-462051
Submitted Dec 10, Rev Feb
22, Publish Mar 30 Review Report
Tamanna A, Nandi
T.,
11 (1): 59-71,
2010.
Department of
Biotechnology, Jaypee Institute of Information Technology University, Noida (UP)
201307, India.
Submitted Oct 16, Rev Feb
24, Publish Mar 30 Review Report
Sarangi AN, Rathi B,
Trivedi N, Gupta S.,
11
(1): 47-58, 2010.
¹Biomedical
Informatics Centre, Sanjay Gandhi Postgraduate Institute of Medical Sciences,
Lucknow 226014, India
Submitted Aug 19, Rev Feb
23, Publish Mar 23 Review Report
Monika K, Dowlathabad MR,
Spain JC, Kadiyala V.,
11
(1): 38-46, 2010.
Dasu S, Williams A, Fofanov
Y, Putonti C.,
11
(1): 34-37, 2010.
Department(s) of
Computer Science and Biology, University of Houston, Department(s) of Biology,
Bioinformatics and Computer Science, Loyola University Chicago, USA
Submitted Jan 9, Rev Jan14,
Publish Mar 18 Review Report
Shityakov S, Rethwilm A,
Dandekar T.,
11
(1): 19-33, 2010.
Institute
for Virology and Immunobiology, University of Wurzburg, Versbacher Str. 7, 97078
Wurzburg, Germany Dept. of Bioinformatics, Biocenter University of Wurzburg,
97074 Wurzburg,Germany,
Submitted Jan 2, Rev Jun 7,
Publish Mar 18 Review Report
De Haan JR, Wehrens R, Bauerschmidt S , Van Schaik RC, Piek E, Buydens LMC., 11 (1): 1-18, 2010.
Institute for Molecules and Materials, Analytical Chemistry, Department of Applied Biology, Centre for Molecular and Biomolecular Informatics, Nijmegen Centre for Molecular Life Sciences, Radboud University
Nijmegen and Schering-Plough, The
Netherlands.
Submitted May 18, Rev Jun 9,
re-submitted Jan 7, Publish Feb28
Review
Report
Mookherjee S, Sinha M, Mukhopa dhyay S, Bhattacharyya NP, Mohanty PK., 10 (2): 280-296, 2009.
Centre for Applied Mathematics and Computational Science, 2Structural Genomics Section, Crystallography and Molecular Biology Division, Theoretical Condensed Matter
Physics Division, Saha Institute of Nuclear Physics,1/AF Bidhan Nagar,
Kolkata, 700064 India.
Submitted Oct 8, Rev Oct 16,
Publish Nov 27 Review Report
Patakottu BR,
Mamidipally C, Patankar S, Noronha S.,
10 (2): 259-279,
2009.
Department of Biosciences and Bioengineering, and Chemical Engineering,
Indian Institute of Technology, Mumbai, India.
Submitted Oct 5, Rev Oct 13,
Publish Nov 17 Review Report
Velineni S, Ramadevi S,
Asuthkar S, Sritharan M.,
10
(2): 241-258, 2009.
Department of Animal Sciences,
University of Hyd erabad, Hyderabad, India; Informatics Division, GVK
Biosciences Pvt Ltd, Hyderabad, India.
Submitted Jul 10, Rev Oct 3,
Publish Oct 30
Review
Report
Zhang S, Lai J .,
10 (2): 233-240,
2009.
Department of Computer Science, Guangzhou Maritime College and School of
Information Science and Technology, Sun Yat-sen University, Guangzhou, P.R.
China.
Submitted Sep 16, Rev Oct 1,
Publish Oct 28
Review
Report
Chandrasekar A, Riju A, Sithara K, Anoop S , Santhosh J
Eapen .,
10 (2): 224-232, 2009.
Bioinformatics Centre, Indian Institute of Spices Research, Marikunnu P.O, Calicut – 673012, Kerala, India
Submitted Jun 18, Sep 15, Publish Oct 15 Review Report
Pabla SS,
Pabla SS, Sajja SP.,
10 (2): 218-223, 2009.
Department of Computer Science, Sardar Patel University, India
Submitted Nov 28, Reviewed Aug 15, Publish Sept 15 Review Report
Liang C, Wolz
C, Herbert S, Bernhard J, Engelmann S, Hecker M, Götz
F, Dandekar T.,
10 (2): 201-217,
2009.
Department of Bioinformatics, University of Würzburg Am Hubland, Würzburg , Institute of Medical Microbiology and Hygiene, Clinical University of Tübingen, Department of Microbial Genetics, University of
Tübingen, Institute of Microbiology, University of Greifswald, EMBL, Heidelberg, Germany.
Submitted Jul 17, Reviewed Jul 29,
Publish August 15
Review
Report
Gao S, Wang X.,
10 (2):191-200, 2009.
Department of Physics & the
Submitted Jul 18, Reviewed Jul 22, Publish August 10
Review
Report
PrintView]
[PDF]
Prabhakaran S, Srividya V, Bharathi N,
Jayakanthan M, Manikanda Boopathi N, 10
(2):180-190, 2009.
Department of Plant
Molecular Biology and Biotechnology, CPMB, Tamil Nadu Agricultural University,
Submitted Jun 21, Reviewed Jul 3, Publish July 23
Review
Report
genes. Wang Y, Leung FC., 10 (2): 165-179, 2009.
School of Biological Sciences and Genome Research
Centre, University of Hong Kong, Pokfulam, Hong
Kong.
Submitted Mar 11, Reviewed May 27, Publish July 1
Review
Report
2009 (1)
[WORD]
[PDF]
DyeML: XML-based format
for handling natural organic dyes
Aghoutane B,
Benslimane R, Chenfour N, Elbannay O, Meknassi M 10
(1):156-164, 2009
Laboratoire de Transmission
et Traitement de l’information (LTTI), Ecole Supérieure de Technologie and UFR
Informatique Avancée, Faculté des sciences Dhar el mehraz, Fez,
Morocco
Submitted Feb 24, Reviewed May 22, Publish April 15
Review
Report
[WORD]
[PDF]
Designing of drug for
removal of methylation from Tcf21 gene in lung cancer
Gupta SK, Singh A, Srivastava M
Department of
Bioinformatics, UIET, CSJM University and DOEACC center of Bioinformatics,
India
Submitted Apr 27, Reviewed May 16, Publish April 15
Review
Report
[WORD]
[PDF]
Determination of
antioxidant stability in heated mixture of oils by neural network
Valantina R, Neelamegham P
Department of Physics and
Electrical Engineeering, SASTRA University, Tamilnadu, India
Submitted Apr 17, Reviewed May 16, Publish May 30
Review
Report
[WORD]
[PDF]
Towards establishing
the molecular function of Pfam Domain DUF294 by sequence analysis and homology
modeling
Gononesekere NCW, Beaudry S, Tasovsky I
Department of Chemistry and
Biochemistry and Department of Biology,
Submitted Apr 23, Reviewed May 1, revised May 4, Publish May 30
Review
Report
[WORD]
[PDF]
Phylogenetic analysis,
homology modeling, molecular dynamics and structure based designing of new
inhibitors against cinnamyl alcohol
dehydrogenase (CAD)
cloned and sequenced from
a leguminous tree subabul (Leucena leucocephala).
Sekhar NP, Kumar RD, Sirisha VL, Prashant S Kavi Kishor PB
Submitted Apr 17, Reviewed Apr 24, Accepted Apr 26, Publish May 30
Review
Report
Prediction of 3-
dimensional structure of GL12 of Homo
Sapiens
Sreekanth P, Narayan J
Submitted Aug 15, Reviewed March 24, Accepted Mar 26, Publish April
30 Review Report
Submitted Aug 21, Reviewed March 19, Accepted Mar 20, Publish April
21 Review Report
Genetic
algorithm self-adaptive mutation rate for DNA folding (GASAMR)
School of Engineering and
Design, School of Computer Science, UB8 3PH, West
London, UK Brunel University, 11800, Universiti Sains Malaysia, Penang,
Malaysia.
Submitted Feb 1, Reviewed March 11, Accepted Mar 14, Publish April 18
Review
Report
A statistical
method for verification of rareness in DNA sequences using sequence
encoding
Departments
of Computer Science, I.T. & Applications and M.C.A., Shrimati
Indira Gandhi College and Postgraduate and Research Department of Physics,
National College, India.
Submitted Nov 1, Reviewed March 9, Accepted Mar 11, Publish April 15 Review Report
Multiple
contrast test for detecting monotonic does-relationship and FDR-adjusted
confidence intervals for selected parameters in a microarray setting
and Clinical Informatics, Beerse, Belgium
Submitted Mar 1,
Reviewed March 9, Accepted Mar 11, Publish April 2
Review Report
[WORD]
[PDF]
Prediction
0f 3-dimensional structure of ORF3 protein of genotype 1 hepatitis E
virus
Submitted Jan
6, Reviewed March 6, Accepted Mar 11, Publish April 2 Review Report
Department of Computer
Science, The
Submitted Feb
13, Reviewed Feb 15, Accepted Feb 16, Publish March 3
Review Report
[WORD]
[PDF]
In silico identification of tandem
inter/intra-generic genetic elements (TIGE) using a random nucleotide generating
Perl program: A potential approach
for locating
structure-function regions of
Division of Cytokine Biology, The Forsyth Institute, Harvard medical
School Affiliate in Oral and Craniofacial Science, Boston, Massachussets,
USA
Submitted Jan 23, Reviewed
Jan 29, Accepted Feb 1, Publish Feb 15
Review Report
Derivation
of a protein marker from heat denatured protein aggregate
Division of Bioinformatics and Allied Sciences, Indian Institute of
Information technology, Allahabad, India
Submitted Sep 27, reviewed Jan 15, accepted Jan 15, publish Feb 15 Review Report
PrintView]
[PDF]
Identification
of potential targets and lead molecules for designing inhibitory drugs
against Chlamydophila
pneumoniae
Department of Biotechnology and
Medical Engineering, National Insitute of Technology,
Rourkela-769008,
Submitted Nov 28, reviewed Jan 5, accepted Jan 10, published Jan 30 Review Report
Homology
modelling, molecular dynamics and docking studies of
human GLUT5 protein involved in intestinal transport
Padmavathi GV, Saralakumari D, Nataraj Sekhar P 10 (1):1-13, 2009
Department
of Biochemistry,
Sri
Krishnadevaraya University, Anantapur, India,
and Katholic University, (leuven,
Belgium
Submitted Dec
3, reviewed Dec 23, Accepted Jan 4, published Jan 30
Review Report
In
silico analysis of PCR amplified DOF (DNA binding with
one finger) transcription factor domain and cloned genes from cereals and
millets
Kushwaha
H, Gupta N, Singh VK, Kumar A, Yadav D 9
(2):130-145, 2008
Department of Molecular Biology and Genetic Engineering,
College of
Basic Sciences and Humanities,
G.B.
Pant
University of Agriculture and
Technology, Pantnagar (UttaraKhand),
India
Submitted
Jul29, reviewed Sep 1, accepted Nov
25, published Dec 30
Review
Report
MOTIFA (Motif
Analizer) examination of interregional and
intraregional distribution of short DNA motifs
Sucaet Y, Magrath C
9 (2):121-129, 2008
Biological and Environmental Science,
Troy
University ,
Troy ,
AL
36082 ,
USA
Submitted October 3, reviewed October 17, accepted October 23, published October 30 Review Report
Homology
based 3D-structure modeling of glucose specific Sesbania stem
lectin
Saxena S, Das HR,
Das D, Biswas S 9
(2):113-120, 2008
Proteomics and Structural Biology Laboratory,
Institute of
Genomics and Integrative Biology,
Delhi
University Campus,
Mall Road 110007,
India
Submitted August 2, reviewed August 20,
accepted August 21, published August 28
Review
Report
CateGOrizer: A web-based program to batch analyze gene
ontology classification categories
Hu Zhi-Liang,
Bao J, Reecy JM 9
(2):108-112, 2008
Department of
Animal Science, Iowa State University, 2255 Kildee Hall and Department of
Computer Science, Iowa State University, 226 Atanasoff
Hall, Ames, Iowa 50011-3150, USA
Submitted August 2, Reviewed August 20,
Accepted August 21, published August 28
Review
Report
In-silico study on interaction of active binding sites of
proteins with calcium oxalate monohydrate
Bijarnia RK, Kaur T, Naik PK, Singla SK, Tandon C 9
(2):92-107, 2008
Department of Biotechnology and Bioinformatics,
Jaypee
University
of
Information Technology, Waknaghat,
Solan and Department of Biochemistry,
Panjab University,
India
Submitted February 26, Reviewed May 23,
Accepted August 10, publish August 25
Review
Report
Identification of
SSR-ESTs corresponding to alkaloid,
phenylpropanoid and terpenoid
biosynthesis in
MAP's
Tripathy KP, Roy S, Khan F
Shasany AK, Sharma A, Khanuja
SPS 9 (1):78-91, 2008
Bioinformatics and In Silico Biology Division, Central
Institute of Medicinal and Aromatic Plants (CSIR),
Lucknow,
India
Submitted June 7, Reviewed May 23, Accepted July 10, publish July 26
Review
Report
Prediction of the
putative function of mouse WDR13 protein
Murthy BSN, Pandit MW, Singh L. 9 (1):60-77,
2008
Centre for
Cellular and Molecular Biology,
Uppal Road ,
Hyderabad – 500 007;
India
Submitted March
11 Reviewed May 13, Accepted June 16, publish June 26
Review
Report
Lecca P. 9 (1): 30-43,
2008
The Microsoft Research-University of Trento Centre for
Computational and System Biology,
Submitted March 13
Reviewed March 27, Accepted April 8, publish April 30
Review
Reports
A comparison
of information on molecular interactions available in full-length publications
versus abstracts
Mahadevan U, Bhate J, Raghunath A,
Kashyap S, Dey PC,
Prakash N, Bhat B, Mol L, Wong,
L 9 (1): 21-29,
2008
Molecular Connections Pvt. Ltd.,
Bangalore, India and Institute for Infocomm Research
(I2R), Singapore.
Submitted November 18 Reviewed September 23, Accepted January 17
Review
Reports
Iyer J, Raghunath A,
Bhate J, Wong L, 9 (1): 12-20,
2008
Molecular Connections Pvt. Ltd,
Basavanagudi, Bangalore, India, and National Institute
of Singapore, Singapore.
Submitted December
27 Reviewed January 23, Accepted January 25
Review
Reports
In
silico analysis of P5CS gene evolution in plants
Kumari A1, Patade VY, Suprasanna P, 9 (1):
1-11, 2008
Plant Cell Culture Technology Section, Nuclear Agriculture &
Biotechnology Division, Bhabha Atomic Research Centre,
Trombay, Mumbai 400 084.
Submitted August 3 Reviewed August 23, December 16 Published January 12
Review
Reports
Molecular
evolution of archaeal CRISPR and Cas genes
Chatterjee R, Dutta A, Chaudhuri K, 8 (2):
189-204, 2007
Molecular & Human
Genetics Division Indian Institute of Chemical Biology,
Jadavpur, Kolkata-700 032,
Submitted October 12 Reviewed November 15 Published
November 29
Review
Reports
Structure and
function prediction of a hypothetical protein (Q307B9_SPIPL) of
Spirulina platensis
(Nordstedt)
Geitler
Lakshmi PTV, Uma
Maheswari S, Annamalai A,
8 (2):
179-188, 2007.
Phytomatics Laboratory, Department of
Bioinformatics,
Canada.
Submitted August 15
Reviewed August 28 Published September 23
Review
Reports
Constructing
phylogeny from whole genome alignment
Chan PY,
Lam TW, Liu CM, Yiu SM
8 (2) : 165-178,
2007
Department
of Computer Science, The
Submitted July
14 Reviewed August 14, 22 Revised August 24 Published August 28
Review
Reports
Vlachakis D, Brancale
A 8 (2) :
154-164, 2007
Welsh
School of Pharmacy, Cardiff University, King Edward VII Avenue, Cardiff, CF10
3XF, United Kingdom
Submitted August 2 Reviewed August 5 Revised August
6 Published August 14
Review
Reports
Shape-to-String
Mapping: A Novel Approach To Clustering Time-Index
Biomics Data
Antoine W, Miernyk JA
8 (2) : 139-153,
2007
Department of Biochemistry USDA, Agricultural Research Service, Plant Genetics
Research Unit and Interdisciplinary Plant Group, University of Missouri,
Columbia, USA
Submitted June 20 Reviewed July 5-6 Revised July
14 Published July 16
Review
Reports
In-silico TAT-PTD prediction for cell penetrating
peptides.
Tandon C, Aggarwal A, Goel P,
Sengupta D, Naik P, 8 (1)
: 115-138, 2007
Department of
Biotechnology and Bioinformatics,
Sengupta D, Verma D,
Department of
Bioinformatics and Biotechnology,
Shaik J, Yeasin M 8 (1) : 84-98, 2007
CVPIA LAB, Department of Electrical and Computer Engineering,
Yadav D, Singh VK, Singh NK
8
(1) :
75-83, 2007
Department of Molecular Biology and Genetic Engineering,
Plant Biotechnology, Indian
Agriculture Research Institute,
In Silico Identification of Antioxidant gene G6PD in
Caenorhabditis
elegans
Jitendra N, Prachi S, Alpana V,
Shakti S 8 (1) : 61-74, 2007
Bioinformatics
Centre, AIB,
An Indigenous
Integration System for Biodiversity Databases
Sarinder
KKS, Lim LHS,
Dimyati K, Merican AF 8 (1) : 56-60,
2007
Institute of
Biological Sciences, Faculty of Science, University of Malaya, and Department of
Electrical Engineering, Faculty of Engineering, University of
Malaya.
Unbalanced
Factorial Design: Type I, II and III Sums of
Squares
Boyacioglu H, Baskan O 8 (1) : 56-55,
2007
Comparative analysis of MMFF94x and AMBER99 force fields using
aspartic-serine-metallo proteases and Sugar-Binding
Proteins as different
data
sets.
Singh H, Marla
SS, Verma D 8 (1) : 45-55,
2007
Biotechnology and
Bioinformatics Department,
Database and
interactome map of genes involved in oral
cancer
Bioinformatics centre
(BTIS Sub-DIC) and Advanced Centre for Treatment Research and Education in
Cancer, Tata Memorial Centre, Kharghar, Navi Mumbai, 410210,
India
PIDA: A new algorithm
for pattern identification
Putonti C, Pettitt BM, Reid JG,
Fofanov Y 8 (1) : 30-40,
2007
Departments of
Computer Science, Biology and Biochemistry, and Chemistry, University of
Houston, Houston Texas, USA
[WORD]
[PDF]
Plasma proteome
knowledgebase: exploring disease biomarker correlations
Iyer J, Srinivas VM,
Khamari L, Sequeira JM,
Das N, Periasamy UR,
Bhate 8 (1) : 18-29,
2007
Molecular Connections
Pvt. Ltd., Bangalore, India
A comparison of
information on molecular interactions available in full-length publications
versus abstracts
Mahadevan U, Bhate J, Raghunath A,
Kashyap S, Dey PC,
Prakash N, Bhat B, Zachariah LL,
Wong, L 8 (1) : 8-17,
2007
Molecular Connections Pvt. Ltd.,
Bangalore, India, and National Institute of Singapore, Republic of
Singapore
[WORD]
[PDF]
In silico tools for evaluation of
conservation homology among
interleukins.
Krupanidhi S, Madhukar SS,
Doughman SD
Department of
Biosciences, Sri Sathya Sai
Institute of Higher Learning, Prasanthinilayam,
Department of Bioinformatics, Sathyabama
Chennai-600
119 TN,
[WORD]
[PDF]
Plant promoter
prediction tool and isolation of a promoter from Porteresis
coarctata
Mahalakshmi S,
Centre for Plant
Molecular Biology, Osmania University, Hyderabad,
India and SR Software, Jubilee Hills, Hyderabad, India
PrintView]
[PDF]
A flexible spot
recognition method for SNP microarray systems
Huang
CY, Liu L 7 (2) : 101-117,
2006
Center for
Pharmacogenomics and Complex Disease Research, University of
Medicine & Dentistry of New Jersey, Newark, NJ 07101, USA and
Department of Applied
Mathematics,
Chung Yuan Christian University, Chung-Li,
PrintView]
[PDF]
A
computer-intensive method to analyse
microarray experiments with a very small number of
replications in case of
heteroscedasticity
Muhammad
MA, Neuhäuser M
7 (2) : 90-100,
2006
Institute for Medical Informatics, Biometry and Epidemiology,
RheinAhrCampus,
Koblenz .
University
of
Applied Science, Südallee 2, D-53424 Remagen, Germany.
In
silico Homology
modeling and Structure assessment of Holo (Acyl Carrier Protein) synthetase
from Treponema
pallidum
Dowlathabad MR, Venkata RD, Rallapalli R
7 (2) : 85 - 89, 2006
Department of Biotechnology, Bioinformatics Laboratory and Department of
Microbiology,
Structural
Classification of Protein Using Surface Roughness Index
Singha S1, Lahiri T1, Dasgupta AK,
Chakrabarti P
7 (2) : 74-84,
2006
Department of Biotechnology, Institute of Engineering & Technology, U. P.
Technical University, Sitapur Road,
Lucknow,
India
[WORD] [PDF]
Genomic predictions
for T Lymphocyte epitopes on Plasmodium
falciparum (Malaria)
Singh SP, Khan F Mishra BN
7 (2) : 69-73,
2006
Department of Biotechnology, Institute of Engineering & Technology, U. P.
Technical University, Sitapur Road, Lucknow-226021
(U.P.) India
[WORD] [PDF]
Conservation of
the regulatory pho-box in acetoacetyl-CoA
reductase promoters
across bacterial PHB biosynthetic metabolic
pathway
Khan F, Singh SP, Mishra BN
7 (2) :
57-68, 2006
Department
of Biotechnology, Institute of Engineering & Technology, U. P. Technical
University, Sitapur Road, Lucknow-226021 (U.P.) India
[WORD] [PDF]
Extending the Dynamic
Range of Signal Intensities in DNA Microarrays
Choi D, O’Malley JP, Lasarev
MR, Lapidus J, Lu X, Pattee
P, Nagalla SR 7 (1) : 46-56,
2006
Division of Biostatistics, Department of Public Health and Preventive Medicine,
Center for Biomarker Discovery, Department of
Pediatrics, Center for Research on
Occupational and Environmental Toxicology,
Comparative
structure analysis of Chorismate synthase
Marla S , Yalamanchili HK, Gelli P, Singh HK, Praveen G, Ghatta G, Srikanth S,
Goutham K. 7 (1) : 35-45,
2006
Biotechnology and Bioinformatics Department, JayaPrakash University of Information technology,
[WORD]
[PDF]
Statistical Potential
Determining Protein Interaction Sites
Williams G
7 (1) : 32-34,
2006
Wolfson Centre for Age Related Diseases, The Wolfson Wing, Hodgkin
Building, Kings College London, United Kingdom.
[WORD] [PDF]
Classification of incipient Alzheimer patients using
gene expression data: Dealing with potential
misdiagnosis
Robbins
K, Joseph S, Zhang W, Rekaya R, Bertrand JK
7
(1) : 22-31, 2006
Department of Animal and Dairy Science, and Statistics,
[WORD] [PDF]
Clusterer: extendable java application for sequence grouping and
cluster analyses
Klepac-Ceraj V, Ceraj I,
Polz MF,
7 (1) 15-21,
2006
Information Services
and Technology, and Department of Civil and Environmental Engineering,
Massachusets Institute of Technology (MIT),
[WORD]
[PDF]
A correction for expression value dependencies in
Affymetrix
Broemel F, Kruse E, Neuhäuser M, Dürig J, JÖckel KH, 7 (1) : 1-14, 2006
Institute for
Medical Informatics, Biometry and Epidemiology, and Department of
Hematology,
Boosting Speed of MS/MS Peptide Sequencing via Database Search by
Spectral Profile Comparison
Liu J, Carrillo B,
Yanofsky C, Beaudrie C, Morales F,
Kearney R
6 (2) 174-183,
2005
Department of Biomedical Engineering,
[WORD] [PDF]
The
Effect of Inverse Document Frequency Weights on DNA Sequence
Retrieval
O'Kane KC
6 (2) 162-173, 2005
Department of Computer Science, The
[WORD] [PDF]
Binding of fork head
protein to DNA partly determined by base cooperation.
Mach V 6 (2)
149-161,
2005
Institute of Entomology, Czech Academy of Sciences,
České Budějovice, Czech
Republic.
Analysis of n-nary tract frequency in the
genome
Ophir D,
Department of Computer Science and
Mathematics, Ariel Academic College in Yudea and
Samaria and ELTA Systems Ltd.
[WORD] [PDF]
In silico
identification of cis-regulatory elements in
Mesorhizobium loti
Khan F, Agrawal S, Mishra BN 6 (2) : 129-141, 2005
Department of Biotechnology, Institute of Engineering & Technology and Jawahar Lal Nehru Center of Advanced Research, Bangalore, India.
A microarray model for
computation of absolute gene expression level
Xu, M
6 (2) : 121-128, 2005
Gene21st,
[WORD] [PDF]
MIPE an XML format to
facilitate the storage and exchange of PCR-related data
Aerts JA, Veenendaal T
6 (2) : 114-120, 2005.
Bioinformatics Group, Roslin Institute,
[PDF]
Automated Long
Oligo Design on Consensus Regions of Similar
Genomes
Schretter C, Milinkovitch MC
6
(1) 107 -113, 2005
Unit
of Evolutionary Genetics (UEG), Institute of Molecular Biology and Medicine
(IBMM), Université Libre de Bruxelles (ULB).
[WORD] [PDF]
Combining Kernel
Dimension-Reduction with Regularized Classifiers for Tissue
Categorization
Shen L, Tan EC 6
(1) : 91-106,
2005
School of Computer Engineering, Nanyang
Technological University, Singapore, 639798.
[WORD] [PDF]
In silico identification and modelling of a putative
iron-regulated TonB-dependant outer
membrane
receptor protein
from the
genome of
Leptospira
interrogans
serovar
Lai
Sritharan M,
Ramadevi S, Pasupala N,
Asuthkar S, Tajne S 6 (1) : 74-90, 2005
Department of Animal Sciences, University of Hyderabad, Hyderabad, India; Informatics Division, GVK Biosciences Pvt Ltd, Hyderabad, India.
[PDF]
Eulerian Superpath Approach to
Correct Sequencing Error in Shotgun Assembly
Shi W,
Zhou W, Zheng W 6 (1) : 65-73, 2005
From prediction
of subcellular localization to functional classification: Discrimination of
DNA-
packing and
other nuclear proteins
Höglund A,
Dönnes P, Adolph HW, Kohlbacher O
6
(1) : 51-64, 2005
Department(s) of Simulation of Biological Systems,
WSI/ZBIT, Eberhard Karls
University Tübingen, Sand 14, D-72076
Tübingen and Biochemistry and Center for Bioinformatics, Saarland University, D-66041,
Saabrücken,
Germany
Substitution
of polymorphic amino acids in proteins:Predicting functional alterations using amino acid
properties.
Baksi K, Bhattacharyya
NP.
Crystallography and Molecular Biology Division, Saha Institute of Nuclear Physics, Kolkata 700 064,
Morphometric and Distance Computational Software for evolutionary
studies.
Carvajal-Rodríguez A,
Rodríguez MG
6 (1) : 34-41, 2005.
Departamento de
Bioquímica, Genética e
Inmunología, Facultad de
Ciencias,
[PDF]
Support vector
machines and bioinformatics
Sethi RJ
Computer Science and Engineering Department and
A novel method
to predict protein subcellular localizations
Huang J, Shi F, 6 (1) : 8-21, 2005.
Schools
of Computer Science, Science, Mathematics and Statistics,
[WORD] [PDF]
MolVRML: build VRML models of 3D molecular
structures
Zou Y, 6 (1)
:1-7, 2005.
Prediction
of transcriptional regulation by Dlx and
Msx homeodomain proteins
Swarnalatha M,
Jutur PP, Amouda V,
Mathur PP, Reddy AR 5 : 132-145, 2004
Bioinformatics Centre, Department of Biochemistry and Molecular
Biology, School of Life Sciences, Pondicherry
University, Pondicherry,
India
[WORD] [PDF]
In
silico gene identification and
homology modeling of Chorismate synthase in Clostridium difficile
Sunita T,
Ramadevi S 5 :129-131, 2004.
Informatics Division, GVK Biosciences
Pvt Ltd,
MCM-Based
clustering for time-course gene expression data
Wu FX, Zhang WJ,
Kusalik AJ 5 :102-128, 2004
Division of Biomedical Engineering, Department of Computer Science,
Zheng W, Shi W, Zhou
W 5 : 91-101, 2004
Bayesian mixture
modelling of species divergence
Adam A, Mengersen K,
Baker P 5 : 69-90, 2004.
INSEE, CREST, Paris, France, Queensland University of Technology and
CMIS, CSIRO, Australia
[WORD] [PDF]
Reliability of RNA secondary structure prediction with
XNAfold
Zou Y 5 : 59-68, 2004.
Wave analysis of microarray expression as
predictor of gene expression in tumors.
Gupta A, Agrawal S
5 : 49-58, 2004.
Indian Institute of Information Technology
Phylogenetic
clustering and secondary structural analysis of Plant Terpenoid Synthases
Singh IV, Agrawal S, Khan F,
Mishra BN 5 : 32-48, 2004.