StatCounter - Free Web Tracker and Counter

counterLegal Notices and Linking to this site 


©1996-2016 All Rights Reserved. Online Journal of Bioinformatics . You may not store these pages in any form except for your own personal use. All other usage or distribution is illegal under international copyright treaties. Permission to use any of these pages in any other way besides the  before mentioned must be gained in writing from the publisher. This article is exclusively copyrighted in its entirety to OJB publications. This article may be copied once but may not be, reproduced or  re-transmitted without the express permission of the editors. This journal satisfies the refereeing requirements (DEST) for the Higher Education Research Data Collection (Australia)  Linking: To link to this page or any pages linking to this page you must link directly to this page only here rather than put up your own page.


OJB®

 Online Journal of Bioinformatics ©

 (Onl J Bioinform©)


Established 1995

ISSN  1443-2250


Scientific Board : Managing Editors:
Guerrini VH., DVM, MVSc, MCompSci, PhD (Bioinformatics, IE),
Alexandra Huger Meister BA, MA (CH),
Rachel Durnsford BA (AU).

 

Scientific Board:
Ben-Miled Z., BSc, MSc, PhD (Computer Engineering, USA),
Bodèn M., BSc, MSc, PhD (Machine learning, sequence analysis, AU),
Böhringer S., MD, BSc, MSc, PhD (Genetic analysis, DE),
Bourne DWA., BPharm, PhD (Pharmacokinetics, USA),
Ceraj I., DipEng, MSc (Software engineering, MIT, USA),
Chen Y., BS, ME, PhD (Bioinformatics, Software electronic engineering, USA)
Colomb RM., BSc, PhD (Informatics, CA),
Daggard G., BSc, PhD (Genetics, AU),
Dressel U., BSc, Hons, PhD (Genetics, DE),
Dubitzky W., Dipl Ing, MSc, DPhil (Bioinformatics, DE),
Filippich LJ., BSc, BVSc, PhD (Genetics, AU),
Gao S., BS, PhD (Bioinformatics, USA),
Goswami C PhD (Molecular and Genomic Pathology, USA),

Harrison J., BSc, MSc, PhD (Data-mining, USA),
Hughes I., BVSc, PhD, (Genetics AU),
Maetschke SR., MSc, PhD (Software, learning, processing, DE),
Jiang Y., BSc, MSc, Msc, PhD, (Data analysis, oncology, USA),
Lea R., BSc, PhD (Genetic analysis, AU),
Liu L  BSc, MS, PhD (Biophysics, Bioinformatics, USA).
Lund EM., DVM, MPH, PhD (Informatics, USA),
Mallick B, M.Tech, PhD (Bioinformatics, USA),
Iquebal MA., BSc, MSc, PhD (Statistics, Bioinformatics, In).
Olsson BE., BSc, MSc, PhD (Bioinformatics, SE),
O'Kane KC., BS PhD (Bioinformatics, USA),
Shadnam MR., BSc, PhD (Nanotechnology, Computer Science, CA)
Shen L., BSc, PhD (Machine Learning, USA),
Singh S PhD., (Medical Education, Orthopaedics, IN)
Song M., PhD (Text Mining, Bioinformatics, Information, USA),
Tang S., BSc, MSc, PhD (Proteomics, Bioinformatics, USA).
Teasdale RG., BSc, PhD (Computational Cell Biology, AU),
Thongboonkerd V, MD, FRCPT (Proteomics, USA).
Wang H., BEng, MSc, PhD (Gene expression, UK)
Wu D BS, PhD (Bioinformatics and drug design, USA),
Yao J MSc, PhD (Plant genomics, USA ),
Zou M., MSc, PhD (Cancer Biology and Human Genetics, USA).


 Authors (Instructions) | Editors | Subscriptions | Impact factor   


SUBSCRIBERS FULL-TEXT IP ACCESS

 

INSTRUCTIONS

Above each title below, click on first 2 links "Printview" or "word" for word file, and  "PDF" for PDF file.

 (contact us for details if you have not received your username/password details)

 

 

CURRENT ISSUES

Tri-Annual

2017 (1) (2) (3)

2016 (1) (2) (3)

2015 (1) (2) (3)

2014 (1) (2) (3)

 2013 (1) (2) (3

 2012 (1) (2) (3

Bi-Annual 

   - 2011(1) (2) - 2010(1) (2) - 2009(1) (2) -  2008(1) (2) -  2007(1) (2) -  2006(1) (2) -  2005(1) (2) 

 

Yearly  

 2000|01|02|03|04

 

Full-Text sample (DOC)                  Full-Text sample (PDF)
 
Best viewed by using 1280 X 1024 pixel screen

 

Abstracts (free) and Full-Text Articles (Subscribers)

Live Search


REPORT BROKEN LINKS, DOWNLOAD PROBLEMS (SUBSCRIBERS) OR PLAGIARISM.


2017 (1)

Authors: This journal requires raw data and program files for analysis.

 

 

 

FULL-TEXT  IP Access [WORD]     [PDF]        

ABSTRACT: Model docking human indoleamine 2,3 dioxygenase for prevention of cataract. 
Vrukonda Nagalaxmi, Turlapati NagaRaju., . Onl J Bioinform., 18(1):39-46, 2017.
Department of Zoology, Physiology Division and University College of Science, Osmania University, Hyderabad-07, India.
Submitted May 12, Rev Jun 11, Publish Jun 19. Review Report, Raw Data (In text)

 

FULL-TEXT  IP Access [WORD]     [PDF]        

ABSTRACT: In silico docking hydrazone derivative with Sortase A from Staphylococcus aureus. 
Prasanna VL, Narender R., Onl J Bioinform., 18(1):30-38, 2017

Vignan institute of Technology and Science Deshmukhi, CMR College of Engineering & Technology, Kandlakoya, Hyderabad, India.

Submitted Jun 2, Rev Jun 10, Publish Jun 17. Review Report, Raw Data (In text)

 

FULL-TEXT  IP Access [WORD]     [PDF]        

ABSTRACT: Homology docking model for histone deacetylase 8. 
Moghaddas AM., Onl J Bioinform., 18(1):19-29, 2017
Department of Genetics, Osmania University, Hyderabad
Submitted Jan 21, Rev May 20, Publish Jun 5. Review Report, Raw Data (In text)

 

FULL-TEXT  IP Access [WORD]     [PDF]        

ABSTRACT: Computational identification of inhibitors of PGES-1 in rheumatoid arthritis by virtual screening and molecular docking. 
Kumar P, Mishra N., Onl J Bioinform., 18(1):7-18, 2017.
Department of Applied Science, Indian Institute of Information Technology- Allahabad, UP-211012, India.
Submitted Apr 3, Rev Apr 5, Publish Apr 10. Review Report, Raw Data (In text)

 

FULL-TEXT  IP Access [WORD]     [PDF]        

ABSTRACT: In-Silico human, cow and sheep milk alpha casein S1, fibronectin, lactoferrin and lysozyme for prediction of hypersensitivity and malnutrition in infants 
Pandey J, Sharma S., Onl J Bioinform.,  18(1):1-6, 2017.
Wrignano Systems Pvt. Ltd., Delhi; Batch of 2015, Department of Life Sciences, Institute of Applied Medicine and Research, Duhai, Ghaziabad, Ottar Pradesh, India
Submitted Jan 3, Rev Jan 10, Publish Jan 25. Review Report, Raw Data (In text)

 


2016 (3)

Authors: This journal requires raw data and program files for analysis.

 

 

FULL-TEXT  IP Access [WORD]     [PDF]     

ABSTRACT: In Silico model and chromosomal location of TaPHT1;1 high-affinity phosphate transporter gene in wheat (Triticum aestivum L.).
Kumar A, Rathore M, Singh KP, Tyagi PK, Sharma N., . Onl J Bioinform., 17(3):180-191, 2016
Advanced Centre for Computational & Applied Biotechnology, Uttarakhand Council for Biotechnology (UCB), Chaudhary Charan Singh Haryana Agricultural University, Department(s) of Biotechnology, MIET, Meerut, UP, Health Research, IRCS Building, New Delhi, Microbial Research Laboratory, Biotechnology, MLS University Udaipur, India
Submitted Nov 11, Rev Nov 15, Publish Nov 25. Review Report, Raw Data (In text)

 

FULL-TEXT  IP Access [WORD]     [PDF]     

ABSTRACT: Review:Molecular modeling computer aided drug design.
Singh N, Upadhyay S, Jaiswar A, Tripathi A, Mishra N., Onl J Bioinform., 17(3):168-179, 2016.
Applied Science Division, Indian Institute of Information Technology, Allahabad, India)
Submitted Nov 9, Rev Nov 11, Publish Nov 20. Review Report, Raw Data (NR)

 

FULL-TEXT  IP Access [WORD]     [PDF]    

ABSTRACT: Homology modeling and molecular dynamic ABC transporter1 anti-bacterial in Antheraea mylitta.
Madipelli K, Rao PN., Onl J Bioinform., 17(3):159-167, 2016.
Department of Zoology, Osmania University, Hyderabad
Submitted Sep 28, Rev Oct 1, Publish Oct 6. Review Report, Raw Data

 


2016 (2)

Authors: This journal requires raw data and program files for analysis.

 

 

 

FULL-TEXT  IP Access [WORD]     [PDF]     

ABSTRACT: In silico binding and inhibition of Sortase A methicillin resistant Staphylococcus aureus.
Souri S, Sharma AK, Sharma G., Onl J Bioinform., 17(2):148-158, 2016.
Department(s) of Pharmacology, NIMS Institute of Pharmacy, Microbiology, Suresh Gyan Vihar University, Shobha Nagar, Jaipur, Rajasthan, India.
Submitted Aug 13, Rev Jul 17, Publish Aug 5. Review Report, Raw Data

 

FULL-TEXT  IP Access [WORD]     [PDF]     

ABSTRACT: Molecular cloning and In-silico analysis of pectin lyase from Aspergillus niger MTCC 404
Dubey AK, Yadav S, Anand G, Singh VK, Yadav D., Onl J Bioinform., 17(2):136-147, 2016.
Department of Biotechnology, D.D.U Gorakhpur University, Gorakhpur, U.P., India
Submitted Jul 13, Rev Jul 17, Publish Aug 5. Review Report, Raw Data

 

FULL-TEXT  IP Access [WORD]     [PDF]     

ABSTRACT: In-Silico docking marine Streptomyces  coumarin-6-ol, 3, 4-dihydro-4, 4, 5, 7-tetramethyl with bacterial and blood protein. 

Abirami M, Kannabiran K., Onl J Bioinform, 17(2):129-135, 2016.
Biomolecular and Genetics Division, School of Biosciences and Technology, VIT University, Vellore, Tamil Nadu, India..
Submitted Jul 7, Rev Jul 10, Publish Jul 19. Review Report, Raw Data

                                                                                                                                                      

FULL-TEXT  IP Access [WORD]     [PDF]      

ABSTRACT: Molecular docking of indolizine heterocyclics. 

Murali Krishna K, Lekha P, Raman PK, Raveendra Reddy P., Onl J Bioinform., 17(2):116-128, 2016
Department of Chemistry, Sri Krishnadevaraya University, Ananthapuramu A.P. SVU college of engineering,sri venkateswara university,tirupati-517502.
Submitted Jun 27, Rev Jun 29, Publish Jul 18 Review Report, Raw Data

 

FULL-TEXT  IP Access [WORD]     [PDF]     

ABSTRACT: Molecular docking imidazo[1,2-b]pyridazine on methicillin resistant Staphylococcus aureus.

Raman PK, Murali Krishna K, Ramana PV*., Onl J Bioinform., 17(2):105-115, 2016.
Department of Chemistry, Sri Krishnadevaraya University, Ananthapuramu – 515 003. A.P., India
Submitted Jun 20, Rev Jun 22, Publish May 26. Review Report, Raw Data

 

FULL-TEXT  IP Access [WORD]     [PDF]      

ABSTRACT: In silico docking of curcumin inhibitor with α-Glucosidase in type 2 diabetes.

Tarigopula SP., Onl J Bioinform., 17(2):96-104, 2016.
Department of Zoology, Sri Krishnadevaraya University, Anantapur, Andhra Pradesh,
Submitted Jun 20, Rev Jun 22, Publish May 26. Review Report, Raw Data

 

FULL-TEXT  IP Access [WORD]     [PDF]   

ABSTRACT: In silico dock-binding for anti-cancer oxadiazole derivatives.

Vijay JT, Babu KV, Uma A., Onl J Bioinform, 17(2):80-95, 2016.
Centre for Biotechnology, Institute of Science and Technology, Jawaharlal Nehru Technological University Hyderabad
Submitted May 14, Rev May 18, Publish May 26. Review Report, Raw Data

 


2016 (1)

Authors: This journal requires raw data and program files for analysis.

 

 

 

FULL-TEXT  IP Access [WORD]     [PDF]     

ABSTRACT: Carragheen (Chondrus crispus) seaweed molecular marker database (CaMM-Db).

Bhati J, Sahu TK, Pande PK., , Onl J Bioinform., 17(1):69-79, 2016
Centre for Agricultural Bioinformatics, Indian Agricultural Statistics Research Institute, Library Avenue, PUSA, New Delhi-110012, INDIA.
Submitted Apr 10, Rev Apr 26, Publish Apr 30. Review Report, Raw Data

 

FULL-TEXT  IP Access [WORD]     [PDF]    

ABSTRACT: In silico modelling-docking diazepin derivatives.

Pyde AN., Onl J Bioinform., 17(1):53-68, 2016
Department of Microbiology, Osmania University, Hyderabad, India
Submitted Mar 16, Rev Mar 26, Publish Apr 4. Review Report, Raw Data

 

FULL-TEXT  IP Access [WORD]     [PDF]    

ABSTRACT: Homology modelling and structure for Neplanocin A derivatives.

Urama DC, Tarigopula SP, Pasha KM, Daddam JR., , Onl J Bioinform., 17(1):41-52, 2016.
Department(s) of Genetics and Biotechnology, Osmania University, Hyderabad. Zoology, Sri Krishnadevaraya University, Anantapur. Humanities & Science, Kuppam Engineering College, Kuppam. Bioinformatics, Global Institute of Biotechnology, Himayath nagar, Hyd-29, India.
Submitted Mar 21, Rev Mar 23, Publish Apr2. Review Report, Raw Data

 

FULL-TEXT  IP Access [WORD]     [PDF]  

ABSTRACT: In silico agonist for human extracellular superoxide dismutase SOD.

Hema K, Swargam S, Pradeep N, Umamaheswari A.,  Onl J Bioinform., 17(1):29-40, 2016.
SVIMS Bioinformatics Centre, SVIMS University, Tirupati–  India
Submitted Jan 23, Rev Feb 17, Publish Feb 24. Review Report, Raw Data (Y in Text)

 

FULL-TEXT  IP Access [WORD]     [PDF] 

ABSTRACT: In silico 3D structure of pectin lyase protein of Aspergillus flavus NRRL 3357.

Dubey AK, Yadav S, Tanveer A, Anand G Singh VK, Yadav D. Pectin., Onl J Bioinform., 17(1):13-28, 2016
Department of Biotechnology D.D.U Gorakhpur University, Gorakhpur, Centre for Bioinformatics, School of Biotechnology, Banaras Hindu University, Varanasi, India.

Submitted Jan 17, Rev Feb 15, Publish Feb 18. Review Report, Raw Data (Y in Text)

 

FULL-TEXT  IP Access [WORD]     [PDF] 

ABSTRACT: Structure based drug design targets for severe acute respiratory syndrome (sars) coronavirus.

Kumar V, Goswami S, Namdeo R, Jain R., Onl J Bioinform., 17(1):1-12, 2016.
Department of Microbiology, Boston College for Professional Studies, Gwalior., IBI Biosolutions Private Limited, Punchkula, Chandigarh
Submitted Jul 23 (13), Rev Feb 2, Publish Feb 12. Review Report, Raw Data (Y in Text)


2015 (3)

Authors: This journal requires raw data and program files for analysis.

 

 

FULL-TEXT  IP Access [WORD]     [PDF]  Username/Password  [WORD]     [PDF] 

ABSTRACT: Machine learning classification for HIV biomarkers.

Dubey A,  Onl J Bioinform., 16(3): 344-356, 2015.
Submitted Oct 23, Rev Oct 31, Publish Nov 9. Review Report, Raw Data (Y in Text)

 

FULL-TEXT  IP Access [WORD]     [PDF]  Username/Password  [WORD]     [PDF] 

ABSTRACT: Gene expression in sickle cell patients: Putative  genes associated with variability in pleiotropic phenotype.

Das I, Mishra H, Khodiar PK, Patra PK., Gene expression in sickle cell patients, Onl J Bioinform., 16(3): 327-343, 2015.
Pt. J.N.M. Medical College, Raipur, Surguja University, Ambikapur, Sickle Cell Institute Chattisgarh, Raipur, India.

Submitted Oct 14, Rev Oct 17, Publish Oct 20. Review Report, Raw Data (Y in Text)

 

FULL-TEXT  IP Access [WORD]     [PDF]  Username/Password  [WORD]     [PDF] 

ABSTRACT: Model simulation phylogenetics of erythropoietin expressed from cho cell line.

Mettaa MK, Tantravahib S, Daddam JR.,  Onl J Bioinform., 16(3): 318-326, 2015.
Department(s) of Biotechnology, GIS, GITAM University, Gandhi Nagar, Rushikonda, Visakhapatnam, Andhra Pradesh, Jawaharlal Nehru  Technological University,  Anantapur, Ananthapuram, Andhra Pradesh, India.

Submitted Oct 3, Rev Oct 12, Publish Oct 17. Review Report, Raw Data (Y in Text)

 

FULL-TEXT  IP Access [WORD]     [PDF]  Username/Password  [WORD]     [PDF] 

ABSTRACT: In silico analysis of arsenate reductase gene in biological systems.

Tiwari S, Sarangi BK, Nasim J, Yadav D., Onl J Bioinform., 16(3): 303-317, 2015.
National Environmental Engineering Research Institute, Council of Scientific and Industrial Research, Nehru Marg, Nagpur, Department of Biotechnology, DDU Gorakhpur University, Gorakhpur, Uttar Pradesh, India.

Submitted Sep 17, Rev Oct 3, Publish Oct  15. Review Report, Raw Data (Y in Text)

 

FULL-TEXT  IP Access [WORD]     [PDF] Username/Password  [WORD]     [PDF] 

ABSTRACT: Model protein docking l-glutaminase for anti-cancer activity.

Vijay Jesuraj SA, Jeya Praya SM, Ravikumar M.,  Onl J Bioinform., 16(3): 293-302, 2015
Centre for Pharmaceutical Sciences, JNT University, Kukatpally, Hyderabad 500 085, Telengana State, Faculty of Pharmacy, Lincoln University College, 47301 Petaling Jaya, Malaysia. Faculty of Pharmacy, Geethanjali College of Pharmacy,  Cheerial, Keesara, Telengana, India.
Submitted Sep 8, Rev Sep 28 Publish Oct 1. Review Report, Raw Data (Y in Text)

 

FULL-TEXT  IP Access [WORD]     [PDF] Username/Password  [WORD]     [PDF] 

ABSTRACT: Molecular modelling-docking cell surface receptor CD10 target for doxorubicin.

Mishra D, Singh VK, Singh S, Narayan G, , Onl J Bioinform., 16 (3): 286-292, 2015.  
Department of Molecular and Human Genetics; Centre for Bioinformatics, School of Biotechnology, Department of Zoology, Cancer Genetics Laboratory, Department of Molecular and Human Genetics,

Banaras Hindu University, Varanasi , India. 
Submitted Aug 16, Rev Sep 28, Publish Sep 18. Review Report, Raw Data (Y in Text)

 

FULL-TEXT  IP Access [WORD]     [PDF]  Username/Password  [WORD]     [PDF] 

ABSTRACT: 3D QSAR, CoMFA and CoMSIA In silico docking of natural flavonoid cancer inhibitors.

Kumar Gunda S., Onl J Bioinform., 16 (3): 263-285, 2015.  
Bio-Informatics Division, Osmania University, Hyderabad, Telangana State, India.
Submitted Aug 28, Rev Serp 2, Publish Sep 10. Review Report, Raw Data (Y in Text)

 


2015 (2)

 

FULL-TEXT [WORD]     [PDF] Username/Password  [WORD]     [PDF] 

ABSTRACT: Review:Genome-wide copy number variation from next generation sequencing data.

Loukatou S, Chatzinikolaou P, Vlachakis D, Kossida S., Onl J Bioinform., 16 (2): 254-262, 2015.
Computational Biology & Medicine Group, Biomedical Research Foundation, Academy of Athens, Computer Engineering and Informatics Department, University of Patras, Bionetwork ltd., Chalandri, Athens, Greece
Submitted Jul 24, Rev Aug 13, Publish Aug 20. Review Report, Raw Data (Y in Text)

 

FULL-TEXT [WORD]     [PDF] Username/Password  [WORD]     [PDF] 

ABSTRACT: Integrating eHealth in HIV/AIDs intervention programmes in Nigeria,

Taiwo OS.,  Onl J Bioinform., 16 (2): 247-253, 2015.
Department of Mathematics,  Federal Government College, Nigeria
Submitted Jul 27, Rev Aug 10, Publish Aug 16. Review Report, Raw Data (Y in Text)

 

FULL-TEXT [WORD]     [PDF] Username/Password  [WORD]     [PDF] 

ABSTRACT: Biclustering of tuberculosis microarray data.

Pradhan S, Verma CK.,  Onl J Bioinform., 16 (2): 226-246, 2015
Department of Mathematics, Bioinformatics and Computer Applications, Maulana Azad National Institute of Technology, Bhopal, India
Submitted Jul 12, Rev Aug 9, Publish Aug 15. Review Report, Raw Data (Y in Text)

 

FULL-TEXT [WORD]     [PDF] Username/Password  [WORD]     [PDF] 

ABSTRACT: Anti-tubercular activity and molecular docking of dihydro-pyrimidinone derivatives.

Beda PD, Vedula SG, Daddam JR.,  Onl J Bioinform., 16 (2): 202-225, 2015.  
Department of Pharmaceutical Chemistry, Bhaskar Pharmacy College, Yenkapally, Moinabad, Rangareddy, Telangana,  Department of Pharmaceutical Chemistry, College of Pharmaceutical Sciences, Andhra University, Vishakapatnam,   Andhra Pradesh, Department of Biotechnology, JNTUA, Ananthapuram, Andhra Pradesh, India.
Submitted Aug 2, Rev Aug 8, Publish Aug 15. Review Report, Raw Data (Y in Text)

 

FULL-TEXT [WORD]     [PDF] Username/Password  [WORD]     [PDF] 

ABSTRACT: Respiratory gating for lung cancer radiotherapy.

KonstantaraK, Danelakis A, Tzogogianni D, Polychronidou E, Venieris G,  Papageorgiou L,  Vlachakis D., Onl J Bioinform.,  16 (2): 194-201, 2015.
Computational Biology & Medicine Group, Biomedical Research Foundation, Academy of Athens, Soranou Efessiou, Athens, Department of Physics, National and Kapodistrian University of Athens, University Campus, Athens, Department  of Informatics and Telecommunications, National and Kapodistrian University of Athens, University Campus, Athens, Department of Informatics, Ionian University, Tsirigoti Square, Corfu, Nuclear Medicine Department, Diagnosis, 166  Alexandras Avenue, Ampelokipoi, Athens, Greece.
Submitted Jul 24, Rev Jul 22, Publish Aug 6. Review Report, Raw Data (Y in Text)

 

FULL-TEXT [WORD]     [PDF] Username/Password  [WORD]     [PDF] 

ABSTRACT: Predicting evolution of colored vision in mammals through systems biology.

Sharma S, Saxena P., Onl J Bioinform., 16 (2): 188-193, 2015.
Life Sciences, Institute of Applied Medicine and Research, Duhai, Ghaziabad, Uttar Pradesh, Bioinformatics, Sathyabama University, Chenna, Tamilnadu, India.
Submitted Nov 3, Rev Jul 12, Publish Jul 19. Review Report, Raw Data (Y in Text)

 

FULL-TEXT [WORD]     [PDF] Username/Password  [WORD]     [PDF] 

ABSTRACT: Antibacterial activity and molecular docking in Musa paradisiaca (Banana) flavonoids.

Sree J, Gunda SK.,  Onl J Bioinform., 16 (2): 179-187, 2015
University College of Science, Bioinformatics Division, Osmania University, Hyderabad, Telangana State, India
Submitted Jul 3, Rev Jul 10, Publish Jul 17. Review Report, Raw Data (Y in Text)

 

FULL-TEXT [WORD]     [PDF] Username/Password  [WORD]     [PDF] 

ABSTRACT: In Silico 2, 5- disubstituted-1, 3, 4-oxadiazole antibacterial activity.

Nagarjun PA,  Rao PN.,  Onl J Bioinform., 16 (2): 156-178, 2015.  
Department(s) of Microbiology, 2Zoology, Osmania University, Hyderabad, India
Submitted May 19, Rev June 16, Publish Juk 2. Review Report, Raw Data (Y in Text)

 

FULL-TEXT [WORD]     [PDF] Username/Password  [WORD]     [PDF] 

ABSTRACT: In silico model simulation docking of tyrosine kinase inhibiting leukemia quinazolines.

Bathula R, Rani Satla S., , Onl J Bioinform., 16 (2): 144-155, 2015.
Centre for Pharmaceutical Sciences, Institute of Science and Technology, JNTUH, Kukatpally, HYD-85. India
Submitted May 12, Rev May 18, Publish May 29. Review Report, Raw Data (Y in Text)

 

FULL-TEXT [WORD]     [PDF]  Username/Password  [WORD]     [PDF] 

ABSTRACT: Prioritizing In Silico drug targets in metabolic pathway of Laribacter hongkongensis.

Aslam Tayubi I., Onl J Bioinform., 16 (2): 129-143, 2015
Faculty of Computing and Information Technology, King Abdulaziz University, Rabigh, Saudi Arabia.
Submitted May 3, Rev May 5, Publish May 12. Review Report, Raw Data (Y in Text)

 

FULL-TEXT [WORD]     [PDF]    Username/Password  [WORD]     [PDF] 

ABSTRACT: In Silico inhibitors for PTP1B as a drug target for diabetes.

Galande S, Ambhore S, Jena L, Kumar S.,  Onl J Bioinform, 16 (2): 121-128, 2015
Biochemistry & Bioinformatics Centre, Mahatma Gandhi Institute of Medical Sciences, Sevagram(Wardha), Maharashtra, India.
Submitted May 3, Rev May 5, Publish May 12. Review Report, Raw Data (Y in Text)

 

FULL-TEXT [WORD]     [PDF]    Username/Password  [WORD]     [PDF] 

ABSTRACT: In silico model design for GPI12 anchored protein,

Bhagyasri RG, Chandrasekhar KB,  Muralidhara RD., IOnl J Bioinform., 16 (2): 109-120, 2015
Department of Chemistry, Jawaharlal Nehru Technological University, Anantapur, Department of Biotechnology, Sri krishnadevaraya University, Anantapur, India
Submitted Apr 10, Rev May 2, Publish May 12. Review Report, Raw Data (Y in Text)

 


2015 (1)

Authors: This journal requires raw data and program files for analysis.

 

 

 

FULL-TEXT [WORD]   [PDF] 

ABSTRACT: In silico binding of Piper longum plant anti-diabetic derivatives with alpha glucosidase.

Sharmila UV, Sharma AR, Sharma G., Onl J Bioinform, 16 (1): 98-108, 2015
Department of Pharmacology, Microbiology Suresh Gyan Vihar University, Pharmacology., Arya College of Pharmacy, Kukas, Jaipur, Rajasthan, India.
Submitted Apr 9, Rev Apr 13, Publish Apr20. Review Report, Raw Data (Y in Text)

 

FULL-TEXT [WORD]     [PDF] 

ABSTRACT: In silico docking of meliantrol, β-sitosterol, curcumin, vanillic and syringic acids  to penicillin binding protein 2a on methicillin resistant Staphylococcus aureus.

Masroor H, Parvateesam M, Daddam JR, Naidu NV., I Onl J Bioinform., 16 (1): 88-97, 2015
Global Institute of Biotechnology, Sai Triveni Chambers, Department of Biotechnology, Akshaya Biological Corporation, Himayath Nagar, Hyderabad, India.
Submitted Feb 21, Rev Feb 26, Publish Mar 12. Review Report, Raw Data (Y in Text)

 

FULL-TEXT [WORD]     [PDF] 

ABSTRACT: Molecular modeling and in-silico characterization of Alkaline Protease from Bacillus circulans MTCC 7906.

Sharma AD, Kaur GRI, Kocher S1, Onl J Bioinform., 16 (1): 61-87, 2015
Department of Biotechnology, Lyallpur Khalsa College, G T Road, Jallandhar, Punjab, Dept of Microbiology, Punjab Agricultural University (PAU), Ludhiana, Punjab, India
Submitted Nov 12, Rev Feb 12, Publish Feb 23. Review Report, Raw Data (Y in Text)

 

FULL-TEXT [WORD]     [PDF] 

ABSTRACT: Biological databases as key for data integration, analysis and visualization.

Polychronidou E, Vlachakis D, Papageorgiou L, Vlamos P., , Onl J Bioinform., 16 (1): 51-60, 2015.
Department of Informatics, Ionian University, Greece, Bioinformatics & Medical Informatics Team, Biomedical Research Foundation, Academy of Athens, Soranou Efessiou 4, Athens 11527, Greece
Submitted Feb 3, Rev Feb 12, Publish Feb 17. Review Report, Data NR

 

FULL-TEXT [WORD]     [PDF] 

ABSTRACT: Support vector machine to predict human death domain protein-protein interactions.

Nemade PA, Pardasani KA., Onl J Bioinform., 16 (1): 29-50, 2015.
Department of Bioinformatics, Maulana Azad National Institute of Technology,  Department of Mathematics, Maulana Azad National Institute of Technology, Bhopal, India
Submitted Jan 22, Rev Feb 2, Publish Feb 8. Review Report, Data NR

 

FULL-TEXT [WORD]     [PDF] 

ABSTRACT: Characterization of mouse body insulin genes with genetic network systems.

Zeeshan A, VermaCK., Onl J Bioinform., 16 (1): 18-28, 2015.
Department of Mathematics, Computer Applications and Bioinformatics, Maulana Azad National Institute of Technology, Bhopal, India

Submitted Jan 11, Rev Jan 17, Publish Jan 25. Review Report, Data NR

 

FULL-TEXT [WORD]     [PDF] 

ABSTRACT: Modelling simulation phylogenetics of leukemia FMS tyrosine kinase 3 (FLT3).

Kotha P, Rayalu Daddam J, Sai Gopal Divi VR,  Dakinedi SR, Dowlathabad M., Onl J Bioinfo., 16 (1): 8-17, 2015
DST-PURSE, Sri Venkateswara University, Tirupati, Department of Biotechnology, JNTUA, Anantapur, 4Department of Chemical Engineering, JNTUA College of Engineering, Anantapur,

Department of Biotechnology, Sri Krishnadevaraya  University, Anantapur, A.P. India.
Submitted Jan 4, Rev Jan 12, Publish Jan 25. Review Report, Data NR

 

FULL-TEXT [WORD]     [PDF] 

ABSTRACT: Systems biology prediction of evolutionary process for coloured vision in mammals.

Sharma S, Saxena P., Onl J Bioinform, 16 (1): 1-7, 2015.

Department of Life science, Institute of applied medicine and research, Duhai, Ghaziabad, Uttar Pradesh. Department of Bioinformatics, Sathyabama University, Chennai, Tamilnadu, India.
Submitted Dec 24, Rev Jan 2, Publish Jan 10. Review Report, Data NR

 


2014 (3)

 

FULL-TEXT [WORD]     [PDF] 

Re-annotation of hypothetical proteins of Geobacter sulfurreducens PCA by  integrated computation,

Selvaraj A, Chinnasamy Perumal R, Chowdhary N, Kannan Kandavel P, Radhakrishnan V, Kumar Gopal R., Onl J Bioinform., 15 (3): 253-266, 2014.
Bioinformatics Lab, AU-KBC Research Centre, M.I.T Campus of Anna University, Chromepet, Chennai 600044, India.
Submitted May 14, Rev Sep 10, Publish Sep 24. Review Report, Data NR

 

FULL-TEXT [WORD]     [PDF] 

Data mining techniques for biological sequence classification

Dubey A., Onl J Bioinform., 15 (3): 243-252, 2014
Department of Mathematics, Computer Applications and Bioinformatics, Maulana Azad National Institute of Technology, Bhopal, India
Submitted May 14, Rev Sep 10, Publish Sep 24. Review Report, Data NR

 

FULL-TEXT [WORD]     [PDF] 

Characterization of mouse insulin gene through genetic and network approaches.

Arif Z, Verma CK.,  Onl J Bioinform., 15 (3): 231-242, 2014.
Department of Mathematics, Computer Applications and Bioinformatics, Maulana Azad National Institute of Technology, Bhopal, India
Submitted Aug 6, Rev Aug 23, Publish Sep 14. Review Report, Data NR

 

FULL-TEXT [WORD]     [PDF] 

In silico drug design inhibitor for methylene-tetrahydrofolate reductase.

Ram G., Onl J Bioinform., 15 (2): 218-230, 2014.
Department of Biotechnology & Bioinformatics, Lyallpur Khalsa College, jalandhar, Punjab, India.
Submitted Jun 6, Rev Jun 7, Publish Jun 9. Review Report, Data NR

 

FULL TEXT [WORD]     [PDF] 

Classification of Type-2 Diabetes Microarray Data by Support Vector Machine and Naive Bayes Classifier

Mekala R, Verma CH., , Onl J Bioinform., 15 (2): 210-217, 2014.
Department of Mathematics & Computer Applications, Department of Mathematics & Computer Applications, MANIT, Bhopal, India.
Submitted Jul 2, Rev Jul 12, Publish Jul 26. Review Report, Data NR

 

FULL TEXT [WORD]     [PDF] 

In silico 17β-Hydroxysteroid dehydrogenase fungicide for leaf spot disease (Cercospora sp).

Singh VK, Chand R, SinghBD., Onl J Bioinform., 15 (2): 198-209, 2014
Centre for Bioinformatics, Department of Mycology and Pathology, School of Biotechnology, Banaras Hindu University, Varanasi- India.
Submitted Jun 25, Rev Jun 27, Publish Jul 3. Review Report, Data NR

 

FULL TEXT [WORD]     [PDF] 

Structure of tumor suppressor gene  protein (PTEN) by homology modelling.

Rathore B, Shakya M., Onl J Bioinform., 15 (2): 191-197, 2014.
Department(s) of Bioinformatics and Mathematics, MANIT, Bhopal- 462051, India
Submitted Jun 8, Rev Jun 10, Publish Jun 16. Review Report, Data NR

 

FULL TEXT [WORD]     [PDF] 

In silico identification of B- and T-cell epitopes from a new wheat associated (Triticum aestivum) allergen Tri a 37,.

Tuhin Ali M, Palit P, Hasan S., Onl J Bioinform., 15 (2): 178-190, 2014
Department of Biochemistry & Molecular Biology, University of Dhaka, Dhaka, Bangladesh, Bioinformatics Lab, QIMR Berghofer Medical Research Institute, Brisbane, Queensland, Australia, School of Medicine, The  

University of Queensland (UQ), Brisbane, Queensland, Australia
Submitted Jun 6, Rev Jun 7, Publish Jun 9. Review Report, Data Y

 

FULL TEXT [WORD]     [PDF] 

Molecular dynamic differences between isoform specific and class I PI3K inhibitor.

Shrivastava A,  Prasad KD, Giri A., s, Onl J Bioinform., 15 (2): 168-177, 2014.
Natco Research Centre, B-13, Industrial estate, Sanath Nagar, Hyderabad, Department of Biotechnology, JNTU, Kukatpally, Hyderabad, India
Submitted Apr 23, Rev May 22 Publish Jun7. Review Report, Data

 

FULL TEXT [WORD]     [PDF] 

Finite element model of calcium distribution in oocytes for one dimensional unsteady state case.

Ahmad Naik P, Pardasani KR.,  Onl J Bioinform., 15 (2): 157-167, 2014
Department of Mathematics, Maulana Azad National Institute of Technology, Bhopal, India.
Submitted May 20, Rev May 28 Publish Jun 6. Review Report, Data


 

 

2014 (1)

 

 

     FULL TEXT [WORD]     [PDF] 

      Mining quantitative associations in peptide sequences of mosquito borne flavivirus.

        Rajput P, Chouhan U.,  Onl J Bioinform., 15 (1): 141-156, 2014.
           Department of Bioinformatics  Manit, Bhopal,India
          Submitted Mar 2, Rev Mar 28 Publish Apr 5. Review Report, Data

 

    FULL TEXT [WORD]     [PDF] 

      ASPMP – A Biochemical Pathway Resource for Aspergillus terreus NIH2624.

        Subazini TK, Ramesh Kumar G., Onl J Bioinform 15 (1): 133-140, 2014.
           AU-KBC Research Centre, MIT Campus of Anna University, Chromepet, Chennai, India. .
           Submitted Mar 12, Rev Mar 28 Publish Apr 2. Review Report, Data

 

    FULL TEXT [WORD]     [PDF] 

      In silico identification of universal HLA stimulating B and T-cell restricted mage epitopes for vaccine development.

        Edith Ojwang AM, Achinko DA2, Dormer A, Musembi R, Mwanda W, Ochanda J.,  Onl J Bioinform., 15 (1): 114-132, 2014.
           Centre for Biotechnology and Bioinformatics (CEBIB), University of Nairobi, International Center of Insect Physiology and  oncology (ICIPE), Nairobi, Kenya, PepVax, Inc. Bethesda, USA, Department of Physics,

           University of Nairobi,  Institute for Tropical and Infectious diseases (UNITID) University of Nairobi, Centre for Biotechnology and Bioinformatics (CEBIB), University of Nairobi, Kenya.
           Submitted Feb 2  Rev Mar 12, Publish Mar 21. Review Report, Data

 

    FULL TEXT [WORD]     [PDF] 

      Calculating binding free energies and docking scores with PI3K inhibitors,

        Shrivastava A, Durga Prasad K, Giri A.,  Onl J Bioinform., 15(1):106-113, 2014.
           Natco Research Centre, B-13, Industrial Estate, Sanath Nagar, Hyderabad, Department of Biotechnology, JNTU, Kukatpally, Hyderabad, India.
           Submitted Jan 12  Rev Feb 11, Publish Feb 17. Review Report, Data

 

    FULL TEXT [WORD]     [PDF] 

      Molecular dynamic simulation docking inhibitors for falcipain – 2.

        Saddala MS, Babu DK, Bhavani G, Ayisha S, Usha Rani A., Onl J Bioinform., 15(1): 98-105, 2014.
           Division of Environmental Biology, DBT- Bioinformatics Center, Department of Zoology, Sri Venkateswara University, Department of Microbiology, Sree Vidyanikethan College, Tirupati A.P., India.
          Submitted Feb 11  Rev Feb 16, Publish Feb 17. Review Report, Data

 

    FULL TEXT [WORD]     [PDF] 

      Structure prediction of alpha-synuclein protein and link with neurodegenerative disease.

        Singh R, Gaur NK, Mohan A, Gangwar P., Onl J Bioinform., 15(1)87-97, 2014.
           Institute of Engineering and Technology, Lucknow, Harcourt Butler Technological Institute, Kanpur, Bio-EGICORE (Dept. of Life Science of EGICORE) Lucknow, India.
           Submitted Feb 2  Rev Feb 6, Publish Feb 15. Review Report, Data

 

     FULL TEXT [WORD]     [PDF] 

       Functional diversity of melanoma antigen proteins implicated in tumor/cancer related pathways.

         Achinko DA, Ojwank AME, Dormer A., Onl J Bioinform., 15 (1): 54-86, 2014.
            International Center of Insect Physiology and Ecology (ICIPE), Nairobi, Kenya, University of Nairobi, Kenya, P.O Box 30197, G.P.O, Nairobi, Kenya, PepVax, Inc.10411 Motor City Drive Bethesda, MD 20817, USA.
 
           Submitted Jan 27  Rev Jan 29, Publish Feb 15. Review Report, Data

 

      FULL TEXT [WORD]     [PDF] 

       Proteome database for Mycobacterium tuberculosis strains H37Rv versus H37Ra.

         Jena L, Kumar S.,  Onl J Bioinform., 15(1): 49-53, 2014.
             Bioinformatics Centre & Biochemistry, Mahatma Gandhi Institute of Medical Sciences,  Sevagram, Maharashtra, Department of Bioinformatics, Shri JJT University, Jhunjhunu, Rajasthan, India
 
           Submitted Dec 29  Rev Jan 8, Publish jan 16. Review Report, Data

 

      FULL TEXT [WORD]     [PDF] 

       Prediction of secondary structure of human OPTC (Opticin) gene in region 1q32.1 of chromosome 1.

         Kumar A,  Khawaja Z.,  Onl J Bioinform., 15(1): 35-48, 2014
            Department(s) of  Bioinformatics, Biotechnology, Uttaranchal College of Science & Technology, Dehradun, India.
 
           Submitted Dec 29  Rev Jan 8, Publish jan 16. Review Report, Data

 

      FULL TEXT [WORD]     [PDF] 

       A novel In silico peptide vaccine design for Streptococcus mutans.

         Bower B, Dormer A., , Onl J Bioinform  15(1):1-34, 2014.
            Washington Adventist University, 7600 Flower Avenue, Takoma Park, Maryland 20912 (301) 891-4229, USA. 
 
           Submitted Dec 23  Rev Jan 3, Publish jan 10. Review Report, Data

 


2013 (3)

Authors: This journal requires raw data and program files for analysis.

 

 

     FULL TEXT [WORD]     [PDF] 

       In silico inhibitors for human papillomavirus 16 E7 protein,

         Kumar S, Jena L, Mohod K, Daf S, Varma A.,  Onl J Bioinform., 14 (3): 302-310, 2013.
            Biochemistry & Bioinformatics Centre, Mahatma Gandhi Institute of Medical Sciences,  Sevagram, Maharashtra, Datta Meghe Institute of Medical Sciences, Nagpur and Advanced Centre for Treatment, Research & 

            Education in Cancer, Khargar, Navi Mumbai, India
            Submitted Oct 5  Rev Oct 24, Publish Oct 30. Review Report, Data

 

     FULL TEXT [WORD]     [PDF] 

      In silico inhibitors for falcipain-3 in Plasmodium falciparum.

        Saddala MS, Gayathri P, Obaiah J,. Vallamma C. Usha Rani A., Onl J Bioinform., 14 (3): 293-301, 2013.
            Dept. of Zoology, DBT-Bioinformatics Center, Sri Venkateswara University, Tirupati.
            Submitted Sep 22  Rev Oct 13, Publish Oct 20. Review Report, Data

 

    FULL TEXT [WORD]     [PDF] 

       Virtual dihydroxy acid dehydratase inhibitors for tuberculosis

        Jena L, Kumar S., , Onl J Bioinform., 14 (3): 282-292, 2013.
            Bioinformatics Centre & Biochemistry, Mahatma Gandhi Institute of Medical Sciences,  Sevagram, Maharashtra and Department of Bioinformatics, Shri JJT University, Jhunjhunu, Rajasthan, India
            Submitted Sep 2  Rev Oct 5, Publish Oct 14. Review Report, Data

 

     FULL TEXT [WORD]     [PDF] 

       Homology modelling of laccase from white-rot fungus Schizophyllum commune.

         Reddy GV, Vijaya CH, Venkateswarlu K., , Onl J Bioinform., Volume 14 (3): 274-281, 2013.
            Department(s) of Biotechnology and Marine Biology,  Vikrama Simhapuri University, Nellore ,  India
            Submitted Sep 25  Rev Sep 30, Publish Oct 3. Review Report, Data

 


2013 (2)

Authors: This journal requires raw data and program files for analysis.

 

 

     FULL TEXT [WORD]     [PDF] 

       Identification  of  PI3K inhibitor scaffold based on ligand and receptor pharmacophore model.

         Shrivastava A, Prasad KD, Giri A., Onl J Bioinform., 14 (2): 258-273, 2013. 
            Natco Research Centre, B-13, Industrial estate, Sanath Nagar, Hyderabad, Department of Biotechnology, JNTU, Kukatpally, Hyderabad, India
            Submitted Sep 21  Rev Sep 24, Publish Sep 30. Review Report, Data

 

    FULL TEXT [WORD]     [PDF] 

       In silico proteins of Flavobacterium columnare as therapeutic candidates for columnaris disease in fish.

         Murali S, Kumar S, Rajendran KV, Jahageerdar S., Onl J Bioinform., 14 (2): 235-257, 2013.
            Fish Genetics and Biotechnology Division, CIFE, Fisheries Resource, Harvest and Post Harvest Management Division, CIFE, Aquatic Environment and Health Management Division, CIFE, Mumbai, India.
            Submitted Aug 12, Rev Sep 2, Publish Sep 12. Review Report, Data

 

    FULL TEXT [WORD]     [PDF] 

         Virtual analysis of catalytic site in Plasmodium yoelii yoelii.

         Kumar A.,  Onl J Bioinform.,  14 (2): 226-234, 2013.
            Department of  Bioinformatics , Uttaranchal College of Science & Technology, Dehradun, India, 
            Submitted Aug 12, Rev Sep 2, Publish Sep 12. Review Report, Data

 

    FULL TEXT [WORD]     [PDF] 

       Virtual inhibitors of L-Type calcium channel.

         Saddala MS, Rani U., Onl J Bioinform.,  14(2):213-225, 2013.
            Department of Zoology, DBT-Bioinformatics center, Sri Venkateswara University, Tirupati – 517502, A.P., India.

            Submitted Jul 15, Rev Jul 24, Publish Aug 18. Review Report, Data

 

    FULL TEXT [WORD]     [PDF] 

       Selection pressure analysis of African swine fever virus attachment protein p12 gene.

         Chen YF, Chen Y.  Onl J Bioinform., 14(2):207-212, 2013.
             School of Software, Harbin Normal University, Heilongjiang Province, China Department of Renewable Resources, University of Alberta, Edmonton, T6G 2H1, Canada.

            Submitted Jun 25, Rev Aug 2, Publish Aug 14. Review Report, Data

 

    FULL TEXT [WORD]     [PDF] 

       Monte Carlo with simulated annealing model for constructing phylogenetic network from nucleotide sequences.

         Dwivedi AK, Chouhan U.,  Onl J Bioinform 14 (2): 197-206, 2013.
            Department of Bioinformatics, Mathematics and Computer Applications, Maulana Azad National Institute of Technology, Bhopal, India., Department of Mathematics and Bioinformatics,

            Maulana Azad National Institute of Technology Bhopal, India.

            Submitted Jun 25, Rev Aug 2, Publish Aug 14. Review Report, Data

 

    FULL TEXT [WORD]     [PDF] 

       Structure based virtual screening for DNS methyl transferase-1 inhibitors.

         Saddala MS, Jyothi P, Usha Rani A.,  Onl J Bioinform 14 (2): 186-196, 2013.
            Dept. of Zoology, DBT-Bioinformatics center, Sri Venkateswara University, Tirupati.

            Submitted Jun 12, Rev June 23, Publish Aug 1. Review Report, Data

 

    FULL TEXT [WORD]     [PDF] 

       Virtual In silico inhibitors of estrogen receptor alpha (ERα)

         Saddala MS, Mallikarjuna A, Latha U, Usha Rani A.,  Onl J Bioinform 14 (2): 168-185, 2013.
            Dept(s). of Zoology and Computer Science, Sri Venkateswara University, Tirupati

            Submitted Jun 23, Rev June 28, Publish July 25. Review Report, Data

 

    FULL TEXT [WORD]     [PDF] 

      Evolutionary lineage of lateral gene transfer in biofilm-forming human pathogenic microorganisms. 

         Mathur N, Chug R.,  Onl J Bioinform.,  14 (2): 160-167, 2013
            Amity Institute of Biotechnology, Amity University, Rajasthan.

            Submitted Apr 28, Rev May 21, Publish Jun 10. Review Report, Data

 

    FULL TEXT [WORD]     [PDF]

       In Silico Inhibitors for Plasmodium falciparum lactate dehydrogenase. 

         Saddala MS, Kumar KK, Usha Rani A., Onl J Bioinform.,  14 (2): 146-159, 2013
            Division of Environmental Biology, Department of Zoology, DBT Bioinformatics Center, Sri Venkateswara University, Tirupati  A.P., India.

            Submitted May 18, Rev May 21, Publish May 29. Review Report, Data

 

    FULL TEXT [WORD]   [PDF]

        Subtractive Genomic identification of drug targets in Leishmania Donovani and l. Infantum.

         Shree T, Khan SA, Saxena S., Onl J Bioinform.,  14 (2): 138-145, 2013
             Institute of Computational Biology, Domlur Layout, Bangalore, Karnataka, Amity University Campus, Malhaur, Gomti Nagar Extension, Lucknow, Uttar Pradesh, India.

            Submitted May 13, Rev May 16, Publish May 28. Review Report, Data

 

    FULL TEXT [WORD] [PDF]

       In silico genome analyses of putative white spot syndrome virus vaccine sites.

         Amos SJ, Nayak S, Umadevi K., Onl J Bioinform.,  14 (2): 126-137, 2013
             DBT – BIF Programme, Department of Marine Living Resources, Andhra University, Visakhapatnam – A. P., India.

            Submitted Mar 15, Rev May 9, Publish May 24. Review Report, Data

 

 

    FULL TEXT [WORD] [PDF]

         Predicted structure of an unknown protein sequence in US patent 8211428.

         Kumar A,  Zakir Khawaja M,  Ul Haq Qureshi A., A. Onl J Bioinform.,  14 (2): 118-125, 2013.
             Department(s) of  Bioinformatics and Biotechnology, Taranchal College of Science & Technology, Dehradun, India, and CENT & Chemistry Department King Fahd University of Petroleum and minerals Dhahran, Saudi Arabia

            Submitted May 6, Rev May 8, Publish May1 26. Review Report, Data

 

        

    FULL TEXT [WORD] [PDF]

       In Silico gene prediction for autosomal recessive cone-rod dystrophy (CORD),

         Khattak NA, Rauf S, Sehgal SA, Shahwar D and Ismail M., Onl J Bioinform., 14 (2): 104-117, 2013

             Department of Biochemistry, PMAS-Arid Agriculture University, Rawalpindi, Department of Bioinformatics and Biotechnology, DES, International Islamic University, Sector H-10, Islamabad, Institute of Biomedical and 

             Genetic Engineering, (IBGE), 24 Mauve Area, G-9/1, Islamabad, Pakistan.

            Submitted Apr 14, Rev Apr 25, Publish May12. Review Report, Data

 

 


2013 (1)

       FULL TEXT [WORD] [PDF]

         In silico prediction of Staphylococcus aureus epitopes (Mastitis vaccine),

         Bajetha G, Rai S, Rai A., 14(1):96-103, 2013.
            Center of Agricultural Bioinformatics, Indian Agriculture Statistics Research Institute, Library Avenue, Pusa Campus New Delhi, India.

            Submitted Mar 3, Rev Mar 12, Publish Mar 18. Review Report, Data

 

       FULL TEXT [WORD] [PDF]

         New footprints into metazoan C-1 family cadherin evolution
         Hasenahuer MA, Casco VH, Izaguirre MF., 14(1):76-95, 2013.
            Microscopy Laboratory Applied to Cell and Molecular Studies. Engineering School, Entre Ríos National University, Argentina.

            Submitted Feb 27, Rev Feb 28, Publish Mar 15. Review Report, Data

 

       FULL TEXT [WORD]    [PDF]

         Identification of single nucleotide polymophisms using CLC and SeqMan transcriptome sequencing data
         Sajnani MR, Bhatt VD, Joshi CG., 14(1):66-75, 2013.
            Department of Animal Biotechnology, College of Veterinary Science and Animal Husbandry, Anand Agricultural University, Gujarat, India.

            Submitted Jan 12, Rev Feb 4, Publish Feb 27. Review Report, Data

 

       FULL TEXT [WORD]    [PDF]

         Sequence informatics of carbonic anhydrase from different source organisms

         Dwivedi VD, Arora S, Sharma J, Pandey A., 14(1):56-65, 2013.
            Forest Pathology Division, Forest Research Institute, Dehradun, India
            Submitted Jan 30, Rev Feb 16, Publish Feb 26. Review Report, Data

    

         FULL TEXT [WORD]    [PDF]

    Amino acid composition model for prediction and identification of Alpha and Epsilon-proteobacteria

        Shanker A, Pardasani KR., 14(1):51-55, 2013.
                 Department of Mathematics, Bioinformatics & Computer Α-plications. MANIT, Bhopal, India.

           Submitted Feb 10, Rev Feb 13, Publish Feb 19. Review Report, Data

 

         FULL TEXT [WORD]   [PDF]

     In Silico drug targets for infectious endocarditis.

        Priyadarshini V, Pradhan D, Munikumar M, Swargam S, Umamaheswari A, Rajasekhar D., 14(1):32-50, 2013.
                 SVIMS Bioinformatics Centre and Department of Cardiology, SVIMS University, Tirupati, India.

           Submitted Feb 6, Rev Feb 10, Publish Feb 20. Review Report, Data

 

         FULL TEXT [WORD]    [PDF]

    Statistical analysis of codon usage in extremely halophilic bacterium Salinibacter ruber DSM13855.

        Sanjukta RK, Farooqi MS, Sharma N, Rai N, Mishra DC, Rai A, Singh DP, Chaturvedi KK., 14(1):15-31, 2013.
                 Centre for Agricultural Bioinformatics, Indian Agricultural Statistics Research Institute, Pusa, New Delhi Central Drug Research Institute, Jhankipuram, Lucknow, National Bureau of Agriculturally Important Microorganisms, Mau Nath Bhanjan, India

           Submitted Jan 24, Rev Feb 3, Publish Feb 5. Review Report, Data

 

         FULL TEXT [WORD]    [PDF]

      In silico prediction and conservancy analysis of promiscuous epitopes in novel adenovirus HAdV-65.

            Islam R, Khan L, Gazi A, Hossain M, Shafrin F, Zaman A, Polash AH., 14(1):9-14, 2013.

            Department of Biochemistry and Molecular Biology, Molecular Biology Laboratory,Department of Genetic Engineering and Biotechnology, University of Dhaka, Bangladesh

            Submitted Jan 3, Rev Jan 21, Publish Jan 28. Review Report, Data


         FULL TEXT [WORD]    [PDF]

]    In silico analysis of flavopiridol analogues with Cdk2 for cancer therapy.

         Jabin D, Vidyarthi AS, Shankaracharya S., 14(1):1-8, 2013.

            Department of Biotechnology, Birla Institute of Technology, Mesra, Ranchi, Jharkhand, India.

            Submitted Dec 21, Rev Jan 4, Publish Jan 12. Review Report, Data


 2012 (3)

 

 

         FULL TEXT [WORD]   [PDF]

    Prediction of crucial water molecules during interaction of curcumin and demethoxycurcumin at active sites of multiple target proteins

         Singh N, Butle A, Misra K., 13(3):418-431, 2012.

           Division of Applied Sciences and Indo Russian Centre for Biothechnology (IRCB), Indian institute of Information Technology, Allahad, Centre for Biomedical Research, SGPGIMS campus, Lucknow, India
            Submitted May 25, Rev June, Publish Nov 12. Review Report, Data

 


2012 (2)

 

        FULL TEXT [WORD] [PDF

    3D Model of Zn2+ Binding Domain of Peptidase M48 Ste24p from Cyanothece Sp. (Strain PCC 7822)

        Patra MC, Rath SN, Bhoi GK, Pradhan SK., 13(2):360-374, 2012.

           Department of Bioinformatics, Orissa University of Agriculture and Technology, Bhubaneswar, Orissa, India.

           Submitted Aug 21, Rev Sept 21, Publish Oct 12, Review Report, Data

 

        FULL TEXT [WORD] [PDF

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif      Virtual PfkB Mycobacterium tuberculosis H37Rv protein

        Nayak S, Umadevi K, Jagannath M., 13(2):331-359, 2012.

           DBT – BIF Programme, Department of Marine Living Resources, Andhra University, Visakhapatnam AP, India,

           Submitted Jun 3, Rev Sept 13, Publish Oct 8, Review Report, Data

 

        FULL TEXT [WORD] [PDF

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif      Characterization of Coilin protein nucleotide binding region in Homo sapiens.

        Zaman A., 13(2):314-330, 2012.

          Molecular Biology Laboratory, Department of Biochemistry and Molecular Biology and Department of Genetic engineering and Biotechnology, University of Dhaka, Bangladesh.

           Submitted Aug 10, Rev Sept 3, Publish Sep 28, Review Report, Data

 

        FULL TEXT [WORD] [PDF

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif     Riboswitch as a target for Streptococcus pneumoniae.

        Mujwar S, Pardasani KR., 13(2):285-313, 2012.

           Department of Mathematics, MANIT Bhopal, India

           Submitted Aug 14, Rev Aug 24, Publish Sep 22. Review Report, Data

 

           FULL TEXT [WORD] [PDF]

Description: Description: http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif      Machine learning models to classify HIV membrane and soluble proteins

          Dubey A, Chouhan U., 13(2):274-284, 2012.

           Department(s) of Bioinformatics and Mathematics, MANIT, BHOPAL (M.P)

           Submitted Jul 6, Rev Aug 22, Publish Sep 18. Review Report, Data

 

           FULL TEXT [WORD] [PDF]

Description: Description: http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif      Homology and molecular docking of Pseudomonas aeruginosa RND MexY efflux pump

           Bhaskar BV, Munichandrababu T, Bhuvaneswar C, Rajendra W., 13(2):260-273, 2012.

           DBT-Bioinformatics Center, Department of Zoology, Sri Venkateswara University, Tirupati.

           Submitted Aug 16, Rev Aug 20, Publish Sep 16. Review Report, Data

 

            FULL TEXT [WORD] [PDF]
Description: Description: http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif       In silico characterization of bacterial, fungal and plant polygalacturonase protein sequence

            Dubey AK, Yadav S, Rajput R, Anand G, Yadav D. 13(2):246-259, 2012.

            Department of Biotechnology, D.D.U Gorakhpur University, Gorakhpur, Mahila Mahavidyalaya, Banaras Hindu University, Varanasi, Uttar Pradesh India., Corresponding author:
            Australian Centre for Plant Functional Genomics, University of Adelaide, Glen Osmond, South Australia 5064, Australia.

            Submitted Aug 12, Rev Aug 18, Publish Sep 12. Review Report, Data


            FULL TEXT [WORD] [PDF]

Description: Description: http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif       Amplification, In-silico classification, characterization and molecular modeling of Histone H2B gene from Setaria cervi

            Yadav SS, SinghVK, Liebau E, Rathaur S., 13(2):232-245, 2012.

             Department of Biochemistry, Centre for Bioinformatics, Faculty of Science, Banaras Hindu University, Varanasi, India and Westfalische Wilhelms-Uinversitat, Institute of Animal Physiology, Department of Molecular

             Physiology, Hindenburgplatz-55, Muenster, Germany.

             Submitted Aug 10, Rev Aug 15, Publish Sep 2. Review Report, Data

 

            FULL TEXT [WORD] [PDF]

Description: Description: http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif       Molecular docking of a beta-2-microglobulin drug target

            Navya P, Hema K, Munikumar M, Swargam S, Umamaheswari A., 13(2):222-231, 2012.

            SVIMS Bioinformatics Centre, Department of Bioinformatics, SVIMS University, Tirupati - India.

            Submitted Jun 14, Rev Jul 25, Publish Aug 12. Review Report, Data

 

            FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif       Microarray informatics and virtual screening for acute myeloid leukemia targets.

         Shree T, Banerjee S, Srivastava S., 13(2):214-221, 2012.

            Institute of Computational Biology, Domlur Layout, Bangalore, Amity University Campus, Malhaur, Lucknow, Uttar Pradesh, India.

            Submitted Jul 16, Rev Jul 16, Publish Aug 2. Review Report, Data

 

            FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif      Mining fuzzy associations among amino acids of class A GPCRs.

         Kumari T, Pardasani KR., 13(2):202-213, 2012.

            Department of Bioinformatics. MANIT, Bhopal, India

            Submitted Jun 26, Rev Jul 14, Publish Jul 29. Review Report, Data

          

            FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif      Drug target H1N2 (swine influenza) and H5N2 (avian influenza):ligand structure design

         Sivan A, Antony S, Reegan AD., 13(2):192-201, 2012.

            Regional Medical Research Institute, ICMR, Port Blair and Division of bioinformatics, Entomology Research Institute, Loyola College, Chennai, India.

            Submitted Jun 21, Rev Jun 28, Publish Jul 19. Review Report, Data

           

            FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif      Amino acid sequence analysis of glutamate dehydrogenase from different source organisms

         Dwivedi VD, Mishra SK., 13(2):184-191, 2012.

            Department of Bioinformatics, UCST, Dehradun and Department of Biotechnology, DDU University, Gorakhpur. India

            Submitted Apr 17, Rev Jun 18, Publish Jul 17. Review Report, Data


2012 (1)

 

 

            FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif      In silico novel MYB transcription factor [EaMYB2R] from Erianthus arundinaceus.
         Kulkarni P, Devarumath RM., 13(1):167-183, 2012.

            Molecular Biology & Genetic Engineering Division, Vasantdada Sugar Institute, Manjari (Bk), Tal. Haveli and Department of Biotechnology, University of Pune, Maharashtra, India

            Submitted June 11, Rev Jun13, Publish Jul 12. Review Report, Data

 

            FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif      In Silico characterization of glycosidase protein sequences from bacterial sources. Comment on and/or review this paper
         Yadav V, Yadav KDS., 13(1):156-166, 2012.

            Department of Chemistry, Deen Dayal Upadhyaya Gorakhpur University, Gorakhpur. India

            Submitted Apr 14, Rev Jun3, Publish Jun 28. Review Report, Data

 

            FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif       In silico analysis of rice and Arabidopsis spp. PIP genes.
         Ramole S, Chouhan U., 13(1):144-155, 2012.

            Department(s) of Bioinformatics and Mathematics, MANIT, Bhopal MP, India

            Submitted Mar 26, Rev May 18, Publish Jun 12, Review Report, Data

          

            FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif      Pharmacophore model of Dengue virus RNA dependent RNA polymerase
         Shree T, Asnet JM, Kumar R, Mohan T, Shenbagarathai R., 13 (1):130-143, 2012

            PG and Reserach Department of Zoology and Biotechnology, Lady Doak College, Narimedu, Madurai, Tamilnadu, Institute of Computational Biology, Bangalore, Schrödinger,

            Bangalore and Department of Biotechnology, New Delhi, India.

            Submitted Apr 16, Rev May 10, Publish May 28, Review Report, Data

          

            FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif       In silico analysis and homology model of legume antioxidant proteins.
        Sarika M, Iquebal A, Rai A., 13 (1):120-129, 2012       

           Centre for Agricultural Bioinformatics, Division of Biometrics and Statistical Modelling, Indian Agricultural Statistics Research Institute, PUSA, New Delhi, India.

           Submitted Feb 18,  Rev May 3, Publish May 21  Review Report, Data

 

           FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif       EST secretome analysis of Radopholus similis nematode.
        Sangeetha K, Babu RO, Eapen SJ., 13(1):103-119, 2012       

           Bioinformatics Center,  Division of crop protection, Indian Institute of Spices Research, Calicut, Kerala, India.

           Submitted Mar 26,  Rev May 3, Publish May 18,  Review Report, Data

 

        FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif       Homology model of sugarcane soluble acid invertase
        Hemanthkumar M, Umamaheswari A., 13(1):93-102, 2012       

           Agricultural Research Station, ANGR Agricultural University, Perumallapalle, SVIMS Bioinformatics Centre, Department of Bioinformatics, SVIMS University, Tirupati.

           Submitted Jan 23,  Rev Apr 4, Publish April 30,  Review Report, Data

          

           FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif       Insights to sequences of PCR amplified pectin lyase genes from different fungal strains
        Dubey AK, Yadav S, Anand G, Bisht NC, Yadav D., 13(1):80-92, 2012
           Department of Biotechnology, D.D.U Gorakhpur University, Gorakhpur (U.P.) National Institute of Plant Genome Research, JNU Campus, New Delhi,India. 

           Submitted Dec11,  Rev Jan 28, Publish March 28,  Review Report, Data

 

        FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif       Molecular modelling and docking of Brugia malayi glutathione reductase
        Yadav SS, Singh VK, Liebau E, Rathaur S., 13(1):59-79, 2012
           Centre for Bioinformatics, Faculty of Science, Banaras Hindu University, Varanasi, India and Westfalische Wilhelms-Uinversitat, Institute of Animal Physiology, Department of Molecular Physiology,  

           Hindenburgplatz-55, Muenster, Germany.
           Submitted Mar 12,  Rev Mar 14, Publish March 28,  Review Report, Data

 

        FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif       In silico homology model of mutated PTEN protein inducing meningioma
        IKaur J, Mohan A, Kumar S, Pallavi A, Malakar K., 13(1):50-58, 2012
           BCS In silico Biology, National Bureau of Fish Genetic Resources, Lucknow U. P., India.
           Submitted Feb 28,  Rev Mar 4, Publish March 18,  Review Report, Data

 

           FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif       Simulation of riboflavin synthase in Eremothecium gossypii  conversion of 6,7-dimethyl-8-ribityllumazine to riboflavin
        Idrus S, Tambunan USF., 13(1):41-49, 2012
           Departement of Chemistry, Faculty of Mathematics and Science, University of Indonesia,  Depok 16424 Indonesia.
           Submitted Nov 18,  Rev Feb 12, Publish Feb 28,  Review Report, Data

 

        FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif       Model and molecular docking substrate stabilization of Microsporum canis keratinase
        Karthik MVK, Syed H, Goswami T, Shukla P., 13(1):33-40, 2012
           Birla Institute of Technology, Mesra, Jharkhand, India.
           Submitted No 18,  Rev Feb 12, Publish Feb 28,  Review Report, Data

 

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif       FULL TEXT [WORD]   [PDF]

        In silico analysis of bacterial DNA polymerases and molecular phylogeny.
        Sridhar M, Manjunath A, Bala Chauhan J, Zameer F., 13(1):27-32, 2012
           Department of Biotechnology and Microbiology, Mahajana Life Science Research Centre, Pooja Bhagavat Memorial Mahajana Post Graduate Centre, K.R.S Road, Metagalli, Mysore,. Karnataka, India.
           Submitted Dec 15,  Rev Jan 13, Publish Feb 8,  Review Report, Data

 

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif       FULL TEXT [WORD]   [PDF]

        In silico horizontal gene transfer and functional motif in GshF protein of Listeria monocytogenes
        Srinivas V, Kreft J, Gopal S., 13(1):14-26, 2012
           Department of Microbiology, University of Mysore, Manasagangotri, Mysore , Karnataka, Indian and Department of Microbiology, Biocenter, University of Wuerzburg, 97074 Wuerzburg, Germany

           Submitted Dec 15,  Rev Jan 13, Publish Feb 8,  Review Report, Data

 

           FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif       In Silico analysis of a consensus QTL for drought resistance in rice (Oryza Sativa L.)     

        Pradeepa N, Shanmuga PP, Jebakumar Prince KS, Kavitha S, Poornima R, Prabhakar MS . Chandra Babu R., 13(1):1-13, 2012
           Department of Plant Molecular Biology and Bioinformatics, Centre for Plant Molecular Biology and biotechnology, Tamil Nadu Agricultural University, Coimbatore, India

           Submitted Dec 8,  Rev Dec 9, Publish Jan 2,  Review Report, Data


2011 (2)

 

 

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif      FULL TEXT [WORD]   [PDF]

        In Silico substrate specificity in bmgt1 and bmgt2 genes of Bacopa monniera glycosyltransferases       Alternative site

        Sharma R, Ruby R, Khan BM, Suresh CG., 12(2):413-430, 2011
           Division of Biochemical Sciences and Plant Tissue Culture Division, National Chemical Laboratory, Pune, India.

           Submitted Sep 12,  Rev Nov 1, Publish Dec 15,  Review Report, Data

 

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif      FULL TEXT [WORD]   [PDF]

        In Silico model of Homo sapiens Nectin-4: a novel anticancer drug target.        Alternative site

        Das D, Preet R, Mohapatra P, Satapathy SR, Kundu CN., 12(2):395-412, 2011
           KIIT School of Biotechnology, KIIT University, Campus-11, Patia, Bhubaneswar, Orissa, India.

           Submitted Jun 23,  Rev Oct 13, Publish Nov 27,  Review Report, Data

 

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif      FULL TEXT [WORD]   [PDF]

        Prediction of 3D model of nuclear export protein of influenza A virus.        Alternative site

        Khewariya D., 12(2):386-393, 2011
           Devi Ahilya University Indore, India

           Submitted Oct 16,  Rev Oct 18, Publish Nov 27,  Review Report, Data

  

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif      FULL TEXT [WORD]   [PDF]

         Evaluation of the severity of asthma by using an artificial neural network        Alternative site

        Kumar A, Singh S, Vennila JJ., 12(2):379-385, 2011
           Department of Bioinformatics, Karunya University, Karunya Nagar, Coimbatore, Tamil Nadu, India
           Submitted Oct 27,  Rev Oct 18, Publish Nov 23,  Review Report, Data

 

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif      FULL TEXT [WORD]   [PDF]

        In silico T cell antigens from proteome of H1N2 swine influenza A virus        Alternative site

        Verma SK, Singh Yadav SK, Kumar A., 12(2):371-378, 2011
           Department of Biotechnology, Institute of Biomedical Education and Research, Mangalayatan University,   Aligarh (U.P), India
           Submitted Oct 17,  Rev Oct 13, Publish Nov 13,  Review Report, Data

           FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif       Analysis of inhibitory activity of 2, 4-diamino-5-methyl-5-deazapteridine (DMDP) derivatives against recombinant human dihydrofolate reductase.      

        Singh S, Kumar A, Vennila JJ., 12(2):357-370, 2011
           Department of Bioinformatics, School of Biotechnology and Health Sciences, Karunya  University, Coimbatore, Tamil Nadu, India.
           Submitted Sep 12,  Rev Oct 10, Publish Nov 3,  Review Report, Data

         

           FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif       Model of a Zn2+ binding domain of peptidase M48 Ste24p from Cyanothece Sp. (Strain PCC 7822)         

        Patra MC, Rath SN, Bhoi GK, Pradhan SK., 12(2):345-356, 2011
           Department of Bioinformatics, Orissa University of Agriculture and Technology, Bhubaneswar, Orissa, India
           Submitted Oct 6,  Rev Oct 10, Publish Oct 27,  Review Report, Data

          

           FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif      Epigenomic regulation of genes involved in anti-stress mechanism in Arabidopsis thaliana using high-throughput genomic data         

        Singh N, Mishra H, Misra K., 12(2):329-344, 2011
           Division of Bioinformatics and allied sciences, Indian Institute of Information Technology, Allahabad, India

           Submitted Sep 4,  Rev Sep 18, Publish Oct 27,  Review Report, Data

 

           FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif       Genetic diversity of hatchery stocks of Macrobrachiumrosenbergii assessed by microsatellite DNA,           

           Suresh E, Reddy AK, Krishna G, Chaudhari A, Sharma R, Babu PG., 12(2):323-328, 2011 

           Division of Fish Genetics and Biotechnology, Central Institute of Fisheries Education, Indian Council of Agricultural Research, Versova, Mumbai, India.  

           Submitted Aug 16,  Rev Sep 18, Publish Oct 24,  Review Report, Data

           

           FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif       Computational analysis of K-Hefutoxin interaction with Kv channels and L-carnitine for molecule against scorpion envenomation.            

           Umamaheswari A, Pradhan D, Priyadarshini V, Munikumar M, Rao S., 12(2):304-322, 2011 

           SVIMS Bioinformatics Centre, Department of Biochemistry SVIMS University, Tirupati, India

           Submitted Jul 5,  Rev Jul 15, Publish Sep 24,  Review Report, Data

 

                FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif       Molecular docking ribavirin with RNA-dependent RNA polymerase crimean-congo hemorrhagic fever virus                  

           Kumar Verma S, Singh Yadav SP, Singh R, Kumar A.,  12(2):304-313, 2011 

           Department of Biotechnology, Institute of Biomedical Education and Research, Mangalayatan University, Aligarh, India.

           Submitted Jun 3,  Rev July 16, Publish Sept 3,  Review Report, Data

 

        FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif       Toxicity of  butachlor assessed by molecular docking to NusB and GroES protein.             Alternative site

           Kumari N, Singh VK, Narayan OP, Rai LC.,  12(2):289-303, 2011 

           Molecular Biology Section, Centre for Bioinformatics, Centre of Advanced Study in Botany, Banaras Hindu University, Varanasi, India.

           Submitted Mar 23,  Rev Jun 15, Publish August 27,  Review Report, Data

 

           FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif       Neighbour joining microarray data clustering algorithm                 Alternative site

           Rajendran B, Murugan V, Premnath K,  Gomez P.,  12(2):274-288, 2011 

           Department of Bioinformatics, Karunya University,  India.

           Submitted Feb 3,  Rev Jun 5, Review Report, Data

 

       FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif      Phylogenetic analysis of mitochondrial 16s rRNA and NADH Dehydrogenase genes of Takifugu (Pisces: Tetraodontiformes: Tetraodontid).                 Alternative site

          Jagannath M, Umadevi K, Subhalaxmi N.,  12(2):255-273, 2011 

           DBT – BIF Programme, Department of Marine Living Resources, Andhra University, Visakhapatnam,  India.

           Submitted Jan 11,  Rev Mar 15, Publish July 17 Review Report, Data

 

           FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif      In-silico inhibition of telomerase associated proteins.                 Alternative site

          Jyoti P, Vidyarthi AS, Shankaracharya M.,  12(2):243-254, 2011 

           Department of Biotechnology, Birla Institute of Technology, Mesra, Ranchi, India.

           Submitted Feb 16,  Rev Mar 8, Publish July 7 Review Report, Data

 

           FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif      A least squares method to determine reticulation in eight grass plastomes                 Alternative site

          Mathur R, Adlakha N., 12(2):230-242, 2011 

           Department of Applied Mathematics & Humanities, Sardar Vallabhbhai National Institute of Technology, Surat, Gujarat, India.

           Submitted Mar 12,  Rev May 29, Publish July 3 Review Report, Data

 

        FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif      Homology modeling and active site analysis of MurB Rrductase: A potential drug target of Legionella pneumophila.                Alternative site

          Priyadarshini V, Pradhan D, Munikumar M, Umamaheswari A., 12(2):217-229, 2011 

           SVIMS Bioinformatics Centre, Department of Bioinformatics, SVIMS University, Tirupati, India.

           Submitted Mar 11,  Rev May 27, Publish July 3 Review Report, Data

 

           FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif      Comparative modeling studies of a hypothetical protein YHR105W from S.Cerevisae genome.                Alternative site

          Rathankar N, Nagendra HG., 12(2):207-216, 2011 

           School of Bioengineering, Department of Bioinformatics, SRM University, Kattankulathur campus, Hennai and Dept. of Biotechnology, Sir M. Visvesvaraya Institute of Technology, Krishnadevarayanagar, Unasamaranahalli,  

           Bangalore, India.

           Submitted Feb 18,  Rev Mar 12. Publish June 28 Review Report, Data File

 


2011 (1)

 

       

        FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif      Computational analysis of diversity coding for 3-KetoAcyl-Co A synthase 20 for fatty acid elongation pathway in plants.               

          Grover M, Kaur S., 12(1):198-206, 2011 

           National Bureau of Plant Genetic Resources, Pusa Campus, New Delhi , India
 
         Submitted Mar 5,  Rev May 12. Publish June 28 Review Report

 

          FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif      In silico identification of residues for anoxia tolerance across species                

          Sahu TK, Rao AR, Alka B, Behera BK, Mohapatra T., 12(1):175-197, 2011 

           Indian Agricultural Statistics Research Institute, New Delhi, Central Inland Fishery Research Institute, Barrackpore, Kolkata, National Research Centre on Plant Biotechnology, New Delhi, India
 
         Submitted May 3,  Rev May 12. Publish June 27 Review Report

          FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif      Detection and classification of two-component osmoregulatory systems.                

          Srividhya KV, Krishnaswamy S., 12(1):167-174, 2011 

           Centre of Excellence in Bioinformatics, School of Biotechnology, Madurai Kamaraj University, Madurai-625021, Tamilnadu, India
 
         Submitted Mar 26,  Rev May 6. Publish June 12 Review Report

 

           FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif      Identification of potential drug targets in M1 strain of Streptococcus pyogenes by differential genomics                

          Trivedi N, Sarangi AN, Naik S, Aggarwal R., 12(1):149-166, 2011 

           Biomedical Informatics Centre, School of Telemedicine and Biomedical Informatics, Sanjay Gandhi Postgraduate Institute of Medical Sciences,  Lucknow, India

          Submitted Oct 16,  Rev May 8. Publish June 4 Review Report

 

          FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif      Homology interaction of acetylcholinesterase (ACh) Toxin C from Dendroaspis polylepis with human ACh          

          Sahu TK, Patra MC, Sarang AN., 12(1):139-148, 2011 

          Indian Agricultural Statistics Research Institute, Institute of Genomics and Integrative Biology, New Delhi, and Sanjay Gandhi Post Graduate Institute of Medical Sciences, Lucknow, Uttar Pradesh, India. 

          Submitted Apr 16,  Rev May 1. Publish May 28 Review Report

 

          FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif      Algorithm to detect Denial of Service (DDoS) in Gnutella hybrid P2P network mapped to artificial immune system          

          Uddin M, Rahman AA., 12(1):115-138, 2011 

          Department of Information Systems, Universiti Teknologi Malaysia Johor Malaysia. 

          Submitted Apr 20,  Rev Apr 23. Review Report

 

          FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif      Molecular docking for substrate stabilization in Thermomyces lanuginosus  11 xylanases.          

          Karthik MVK, Shrivastava S, Shukla P., 12(1):107-114, 2011 

          Birla Institute of Technology, Mesra, Ranchi, Jharkhand, India 

          Submitted Nov 15,  Rev Feb 16, Publish May 17 Review Report

 

          FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif      Virtual screening of human MEK1 protein inhibitors catechin and gw8510.          

          Potluri V, Pradhan D, Umamaheswari A., 12(1):98-106, 2011 

          SVIMS Bioinformatics Centre, Department of Bioinformatics, SVIMS University, Tirupati, India     

          Submitted Nov 15,  Rev Feb 16, Publish May 17 Review Report

 

          FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif      Self organizing  algorithm for multiple sequence alignment          

          Amouda V, Buvaneswari S, Kuppuswami S., 12(1):74-84, 2011 

          Centre for Bioinformatics, Department of Computer Science R.V. Nagar, Kalapet, Pondicherry University, India     

          Submitted Nov 11,  Rev Feb 16, Publish May 7 Review Report

 

          FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif      Partial sequence clone of canine mammary tumor metalloproteinase MMP11 catalytic domain     

          Sunil Kumar BV, Kataria M, Kumar R, Kumar KA, Vishwanatha Reddy AP., 12(1):66-73, 2011 

          Enzymology lab., Division of Biochemistry, Indian Veterinary Research Institute, Izatnagar, Bareilly, India.

          Submitted Apr 22,  Rev Feb 15, Publish Apr 28 Review Report

 

         FULL TEXT [WORD]   [PDF]  From Here!!!!

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif      Inhibition of Farnesyl pyrophosphate by allosteric site drug binding      

          Kumar S, Pathak J, Asha PJ, Bandopadhyay R., 12(1):57-65, 2011 

          Department of Biotechnology, Birla Institute of Technology, Mesra, Ranchi, Jharkhand, India

          Submitted Feb 12,  Rev Feb 15, Publish Apr 27 Review Report

 

          FULL TEXT [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif      ABSTRACT  In silico epitope rabies virus vaccine.   

          Tomar NR, Marla SS, Chandra R, Kumar R, Kumar A., 12 (1): 46-52, 2011. 

          Department(s) of Molecular Biology and Genetic Engineering, G.B.Pant university of Agriculture and Technology and Veterinary Microbiology, G. B. Pant University of Agriculture and Technology, Pantanagar-  

          Animal Biotechnology section, Central Sheep and Wool Research Institute, Avikanagar, India

          Submitted Apr 3,  Rev May 6, Dec 3, Publish Jan 8 Review Report

 

          FULL TEXT  [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif       ABSTRACT In Silico mining of single nucleotide polymorphisms in expressed sequence tags dataset of Allium cepa L.   

          Radhika V, Reddy DCL, Bhardwaj A, Aswath C., 12 (1): 34-45, 2011

          Division of Biotechnology, Indian Institute of Horticultural Research, Hessaraghatta Lake, Bangalore , India.

          Submitted Apr 3,  Rev May 6, Dec 3, Publish Jan 8 Review Report

 

          FULL TEXT  [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif      ABSTRACT  Comparative evolutionary analysis of metallo-β-lactamases with reference to NDM1   

          Odedra D, Mallick M, Vidyarthi AS, Shankaracharya D., 12 (1): 18-33, 2011. 

          Department of Biotechnology, Birla Institute of Technology, Mesra, Ranchi, India

          Submitted Nov 23,  Rev Dec 12, Publish Feb 8 Review Report

 

          FULL TEXT   [WORD]   [PDF]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif      ABSTRACT  Prediction of mutagenicity of compounds by Support Vector Machine     Alternative site

          Sharma A, Kumar R, Varadwaj P., 12 (1): 9-17, 2011. 

          Department of Bioinformatics, Indian Institute of Information Technology Allahabad,Deoghat, Jhalwa, Allahabad, Amity Institute of Biotechnology (AIB), Amity University Uttar Pradesh, Lucknow, Uttar Pradesh, India

          Submitted Sep 5,  Rev Oct 8, , Publish Jan 7 Review Report

 

          FULL TEXT [WORD]   [PDF ]

http://users.comcen.com.au/Documents%20and%20Settings/Vincent/My%20Documents/htdocs/ojb/MAIN2004/grrnd06.gif      ABSTRACTSupport vector machine classification and prediction of lyases.    Alternative site

          Lavanya Rishishwar L, Mishra N, Pant B, Pant K, Pardasani KR, 12 (1): 1-8, 2011. 

          Department of Bioinformatics, Maulana Azad National Institute of Technology, Bhopal, India  

          Submitted Oct 17  Rev May 6, Dec 3, Publish Jan 8 Review Report

 


2010 (2)


        

          FULL TEXT  [WORD]   [PDF]

      ABSTRACT  Molecular identification of Pinctada oysters by mitochondrial DNA analysis.    Alternative site

          Yassien MH, Obata M, Iman MK, Komaru A.,11 (2): 317-326, 2010.. 

          National Institute of Oceanography and Fisheries and National Research Center, Egypt and Faculty of Bioresources, Mie University, Tsu City, Mie Prefecture, Japan.

          Submitted Oct 3,  Rev Oct 6,  Review Report

 

        FULL TEXT [WORD]   [PDF] 

      ABSTRACT Model ligand-binding site of 2-Amino-5-chlorophenol 1,6-dioxygenase in Comamonas sp. CNB-1.        Alternative site                      

          Monika K, Muralidhara Rao D,  Anuraj N, Yadav M, Nageswara Rao N, Venkateswarlu K., 11 (2): 302-316, 2010. 

          Department of Microbiology/Biotechnology, Sri Krishnadevaraya University,  Bioinformatics Research Laboratory, Eminent Biosciences, Indore, Department of Chemistry, MVR College of Engineering and Technology, India.

          Submitted Aug 24,  Rev Sep 6,  Publish Nov 3, Review Report

 

        FULL TEXT [WORD]   [PDF]

      ABSTRACT In silico analysis of α-L-rhamnosidase protein sequences from different source organisms.     Alternative site

          Yadav V, Yadav D, Singh Yadav KD., 11 (2): 293-301, 2010.. 

          Department(s) of Chemistry and Biotechnology, DDU Gorakhpur University, Gorakhpur, India.

          Submitted July 31,  Rev Sep 6,  Publish Nov 3, Review Report

 

        FULL TEXT [WORD]   [PDF]

      ABSTRACT Building a topological inference with qualitative criteria to predict the structural family of a protein sequence.       Alternative site

          Gaci O., 11 (2): 11 (2): 282-292, 2010.. 

          Le Havre University,  Le Havre – France

          Submitted Dec 21,  Rev Aug 9,  Review Report

 

          FULL TEXT [WORD]   [PDF] 

      ABSTRACT Predicted 3D structure, active site and ligand docking of serine acetyltransferase, a drug target for Entamoeba histolytica.   Alternative site

          Agarwal SM, Raghav D, Kumar A., 11 (2): 11 (2): 265-281, 2010.. 

          Bioinformatics Division, Institute of Cytology and Preventive Oncology, Uttar Pradesh, India
          Submitted Jun 28,  Rev Sep 4,  Publish Oct 23  Review Report

        

          FULL TEXT [PDF]

     ABSTRACT Analysis of array CGH data for the detection of single-cell chromosomal imbalances.
          Ampe M, Verbeke G, Vanneste E, Vermeesch JR., 11 (2): 244-264, 2010. 

          Interuniversity Institute for Biostatistics and statistical Bioinformatics, Katholieke Universiteit Leuven and Universiteit Hasselt and, Centre for Human Genetics (CME), Katholieke Universiteit Leuven, Belgium
          Submitted Jul 16,  Rev Jul 18,  Publish Aug 24  Review Report

        
 FULL TEXT [WORD]   [PDF]

      ABSTRACT Target sites for microRna expressed in pancreatic islets in type 2 diabetes mellitus associated genes.
          Sripathi VR, Pal-Bhadra M, Arora N, Santosh S, Ray P, Banerjee AK, Murty USN, Bhadra U., 11 (2): 224-243, 2010

          Centre for Chemical Biology and Biology Division, Indian Institute of Chemical Technology (IICT), and Functional Genomics and Gene Silencing Group, Centre for Cellular and Molecular Biology (CCMB), Hyderabad, India. and NRES,
          Department of Natural Resources and Environmental Sciences.
Alabama A & M University, Normal, USA.

          Submitted May 17,  Rev April 15,  Publish July 7  Review Report


         
FULL TEXT [WORD]   [PDF]

     ABSTRACT XML storage model preserving relational integrity constants and complex types
          Kasri LA, Chenfour N., 11 (2): 217-223, 2010

          Laboratoire Inf LAormatique et Nouvelles Technologies de l’information, University Sidi Mohamed Ben Abdellah (USMBA) Fez Morocco, , Faculté des Sciences Dhar el mehraz Fez Morocco.
          Submitted May 17,  Rev April 15,  Publish July 7  Review Report


       FULL TEXT [WORD]   [PDF]

      ABSTRACT Inferring the kinetic constants of cyclin-triggered expression of Cdc20 gene in eukaryotic cell cycle
          Lecca P, Palmisano A., 11 (2): 177-216, 2010

          The Microsoft Research - University of Trento Centre for Computational and Systems Biology, 38123 Povo (Trento), Italy
          Submitted April 10,  Rev April 12,  Publish May 25  Review Report


2010 (1) 

         PrintView]   [PDF]

     Full-length DNA cloning, sequence analysis and transmembrane topology modelling of putative Trypanosoma brucei rhodesiense oligosaccharyl transferase (TbOST I)
          Baticados WN, Inoue N, Sugimoto C, Nagasawa H, Baticados AM., 11 (1): 155-, 2010

          College of Veterinary Medicine,University of the Philippines Los Baños, Laguna; National Research Center for Protozoan Diseases, Obihiro University of Agriculture and Veterinary Medicine,  Obihiro, Hokkaido 8555,

          Japan and Laboratory of Infectious Diseases, Graduate School of Veterinary Medicine, Hokkaido University, Sapporo 060-0818, Japan.
          Submitted April 10,  Rev April 12,  Publish May 25  Review Report

 

         PrintView]   [PDF] 

     Statistical approach to assign functional regulators in gene expression compendia

          Anyiawung FC,  Verbeke G  Valkenborg D,  Zhao H, Marchal K, Engelen K., 11 (1): 145-, 2010

          Interuniversity Institute for Biostatistics and statistical Bioinformatics, Katholieke Universiteit Leuven, Kapucijnenvoer 35, Blok D, bus 7001, B3000 Leuven, Interuniversity Institute for Biostatistics and statistical

          Bioinformatics,Universiteit Hasselt, Agoralaan 1, B3590 Diepenbeek, Department of Microbial and Molecular Systems, Katholieke Universiteit Leuven, Leuven, Flemish Institute for Technological Research (VITO), 

          Boeretang 200, B2400, Mol, Belgium.
          Submitted April 4,  Rev April 6,  Publish May 15  Review Report

 

         PrintView]   [PDF]

     Structural model of the mammalian target of rapamycin (mTOR) kinase domain

          Tobak A, Arora S, Welsh WJ., 11 (1): 128-144, 2010

          Department of Pharmacology, University of Medicine & Dentistry of New Jersey-Robert Wood Johnson Medical School (UMDNJ-WJMS) & Informatics Institute of UMDNJ, Piscataway and 2 NJ Center for Science,

          Technology and Mathematics, Kean University, Union, NJ 07083, USA.
          Submitted March 28,  Rev April 3,  Publish May 7  Review Report

 

         PrintView]   [PDF]  

     Selection and evaluation of gene-specific biomarkers in pre-clinical and clinical microarray experiments

          Lin D, Shkedy Z, Molenberghs G, Talloen W, Goelhmann HWH, Bijnens L., 11 (1): 106-127, 2010

          BioStat, Universiteit Hasselt and Katholieke Universiteit Leuven, Janssen, Beerse, Belgium.
          Submitted March 28,  Rev April 3,  Publish May 3  Review Report

 

         PrintView]   [PDF] 

     Functional and comparative genomics studies on Carboxydothermus hydrogenoformans specific to CO-metabolism and hydrogen production

          Rajadurai  CP, Kumar GP., 11 (1): 90-105, 2010

          Bioinformatics Lab, AU-KBC Research Centre, MIT Campus, Anna University Chennai, Chromepet, Chennai 600 044.India.
          Submitted Nov 13,  Rev Feb 20,  Publish Apr 5  Review Report

 

         PrintView]   [PDF] 

     Brain tumor biomarker identification via differential gene expression analysis of microarray data using CGAP

          Ravichandran S, Jeyakumar N., 11 (1): 83-89, 2010

          Data Mining and Text Mining Laboratory, Department of Bioinformatics, Bharathiar University, Coimbatore, India.
          Submitted Dec 17,  Rev Feb 2,  Publish Apr 2  Review Report

 

         PrintView]   [PDF] 

     A Linear Programming Approach to Study Phylogenetic networks in Honeybee
          Chouhan U, Pasandi KR., 11 (1): 72-82, 2010

          Department of Mathematics,MANIT, Bhopal, India-462051
          Submitted Dec 10,  Rev Feb 22,  Publish Mar 30  Review Report

 

         PrintView]   [PDF]

     In silico identification of functions enduring horizontal gene transfer in archaea: a comparative approach
          Tamanna A, Nandi T., 11 (1): 59-71, 2010

          Department of Biotechnology, Jaypee Institute of Information Technology University, Noida (UP) 201307, India.
          Submitted Oct 16,  Rev Feb 24,  Publish Mar 30  Review Report

 

          PrintView]   [PDF] 

     Identification & HLA distribution analysis of CD4+ epitope-based vaccine candidates for H1N1 Swine Influenza
          Sarangi AN, Rathi B, Trivedi N, Gupta S., 11 (1): 47-58, 2010

          ¹Biomedical Informatics Centre, Sanjay Gandhi Postgraduate Institute of Medical Sciences, Lucknow 226014, India
          Submitted Aug 19,  Rev Feb 23,  Publish Mar 23  Review Report

 

          PrintView]   [PDF]

     Phylogenetic Clustering and Comparative Homology Modelling of Nitrobenzene Nitroreductase from Pseudomonas pseudoalcaligenes JS45 and Comamonas sp. CNB-1
          Monika K, Dowlathabad MR, Spain JC, Kadiyala V., 11 (1): 38-46, 2010

 

          PrintView]   [PDF] |

     csPCR: A computational tool for the simulation of the Polymerase Chain Reaction
          Dasu S, Williams A, Fofanov Y, Putonti C., 11 (1): 34-37, 2010

          Department(s) of Computer Science and Biology, University of Houston, Department(s) of Biology, Bioinformatics and Computer Science, Loyola University Chicago, USA 
          Submitted Jan 9,  Rev Jan14,  Publish Mar 18  Review Report

      
          PrintView]
   [PDF] |

     Structural and docking analysis of HIV-1 integrase and Transportin-SR2 interaction: Is this a more general and specific route for retroviral nuclear import and its regulation?
          Shityakov S, Rethwilm A, Dandekar T., 11 (1): 19-33, 2010

           Institute for Virology and Immunobiology, University of Wurzburg, Versbacher Str. 7, 97078 Wurzburg, Germany Dept. of Bioinformatics, Biocenter University of Wurzburg, 97074 Wurzburg,Germany,
          Submitted Jan 2,  Rev Jun 7,  Publish Mar 18  Review Report

         
          PrintView]
   [PDF]

     Beyond single p-value cut-offs: Methods to improve decision making in GO enrichment analysis of microarray experiments

          De Haan JR, Wehrens R, Bauerschmidt S , Van Schaik RC, Piek E, Buydens LMC., 11 (1): 1-18, 2010

          Institute for Molecules and Materials, Analytical Chemistry, Department of Applied Biology, Centre for Molecular and Biomolecular Informatics, Nijmegen Centre for Molecular Life Sciences, Radboud University  

          Nijmegen and Schering-Plough, The Netherlands.
          Submitted May 18,  Rev Jun 9, re-submitted Jan 7, Publish Feb28  Review Report



2009 (2)

 

      

          PrintView]   [PDF]      

     Analysis of clustered microRNA in biological pathways

          Mookherjee S, Sinha M, Mukhopa dhyay S, Bhattacharyya NP, Mohanty PK., 10 (2): 280-296, 2009

          Centre for Applied Mathematics and Computational Science, 2Structural Genomics Section, Crystallography and Molecular Biology Division, Theoretical Condensed Matter

          Physics Division, Saha Institute of Nuclear Physics,1/AF Bidhan Nagar, Kolkata, 700064 India.
          Submitted Oct 8,  Rev Oct 16, Publish Nov 27  Review Report

 

          PrintView]   [PDF]

     In Silico analysis of translation initiation sites from P. falciparum
 
        
Patakottu BR, Mamidipally C, Patankar S, Noronha S., 10 (2): 259-279, 2009

          Department of Biosciences and Bioengineering, and Chemical Engineering, Indian Institute of Technology, Mumbai, India.
          Submitted Oct 5,  Rev Oct 13, Publish Nov 17  Review Report

 

          PrintView]   [PDF] |

     Effect of iron deprivation on expression of sphingomyelase in pathogenic serovar Lai
 
        
Velineni S, Ramadevi S, Asuthkar S, Sritharan M., 10 (2): 241-258, 2009

          Department of Animal Sciences, University of Hyd erabad, Hyderabad, India; Informatics Division, GVK Biosciences Pvt Ltd, Hyderabad, India.
          Submitted Jul 10,  Rev Oct 3, Publish Oct 30  Review Report

 

          PrintView]   [PDF] |

     An algorithm for edit distance of genome rearrangement based on seriate-block mutation
 
        
Zhang S, Lai J ., 10 (2): 233-240, 2009

          Department of Computer Science, Guangzhou Maritime College and School of Information Science and Technology, Sun Yat-sen University, Guangzhou, P.R. China.
          Submitted Sep 16,  Rev Oct 1, Publish Oct 28  Review Report

 

          PrintView]   [PDF]

     Single nucleotide polymorphisms (SNPs) and indels in expressed sequence tag libraries of turmeric (Curcuma longa L.)
 
        
Chandrasekar A, Riju A, Sithara K, Anoop S , Santhosh J Eapen ., 10 (2): 224-232, 2009

          Bioinformatics Centre, Indian Institute of Spices Research, Marikunnu P.O, Calicut – 673012, Kerala, India

          Submitted Jun 18,  Sep 15, Publish Oct 15  Review Report

          PrintView]   [PDF]

     Prolyzer: A wireless application for physico-chemical analysis of protein sequences
          Pabla SS, Pabla SS, Sajja SP., 10 (2): 218-223, 2009

          Department of Computer Science, Sardar Patel University, India

          Submitted Nov 28,  Reviewed Aug 15, Publish Sept 15  Review Report

          PrintView]   [PDF]

     GENOVA: A rapid genome vizualization and functional genomics software applied to strain comparisons in Staphylococcus aureus
          Liang C, Wolz C, Herbert S, Bernhard J, Engelmann S, Hecker M, Götz F, Dandekar T., 10 (2): 201-217, 2009

          Department of Bioinformatics, University of Würzburg Am Hubland,  Würzburg , Institute of Medical Microbiology and Hygiene, Clinical University of Tübingen,  Department of Microbial  Genetics, University of 

          Tübingen, Institute of Microbiology,  University of Greifswald, EMBL,  Heidelberg, Germany.

          Submitted Jul 17,  Reviewed Jul 29, Publish August 15  Review Report
 

          PrintView]   [PDF]

     Identification of active gene modules during pancreatic development
         
Gao S, Wang X., 10 (2):191-200, 2009
          Department of Physics & the Comprehensive Diabetes Center, University of Alabama at Birmingham, Birmingham, AL, 35294, USA.      
          Submitted Jul 18,  Reviewed Jul 22, Publish August 10  Review Report

          
PrintView]   [PDF]

     Use of computational and structural bioinformatic strategies in controlling fusarium wilt in cotton
          
Prabhakaran S, Srividya V, Bharathi N, Jayakanthan M, Manikanda Boopathi N, 10 (2):180-190, 2009.

          Department of Plant Molecular Biology and Biotechnology, CPMB, Tamil Nadu Agricultural University, Coimbatore 641003, India.
          Submitted Jun 21,  Reviewed Jul 3, Publish July 23  Review Report
         

          PrintView]   [PDF]

     Comparative genomic study on context-dependence of CpG mutations:Acceleration effect of 5' T nucleotides and new evidence of strand assymetry in

          genes. Wang Y, Leung FC., 10 (2): 165-179,  2009.

          School of Biological Sciences and Genome Research Centre, University of Hong Kong, Pokfulam, Hong Kong.
          Submitted Mar 11,  Reviewed May 27, Publish July 1  Review Report
  


2009 (1)



          [WORD]   [PDF]
     DyeML: XML-based format for handling natural organic dyes       
         
Aghoutane B, Benslimane R, Chenfour N, Elbannay O, Meknassi M 10 (1):156-164, 2009

               Laboratoire de Transmission et Traitement de l’information (LTTI), Ecole Supérieure de Technologie and UFR Informatique Avancée, Faculté des sciences Dhar el mehraz, Fez, Morocco.
          Submitted Feb 24,  Reviewed May 22, Publish April 15  Review Report
 

          [WORD]   [PDF]
     Designing of drug for removal of methylation from Tcf21 gene in lung cancer       
          Gupta SK, Singh A, Srivastava M
10 (1):149-155, 2009
          Department of Bioinformatics, UIET, CSJM University and DOEACC center of Bioinformatics, India.
          Submitted Apr 27,  Reviewed May 16, Publish April 15  Review Report
  
       [WORD]   [PDF]

     Determination of antioxidant stability in heated mixture of oils by neural network       
          Valantina R, Neelamegham P
10 (1):134-148, 2009
          Department of Physics and Electrical Engineeering, SASTRA University, Tamilnadu, India.
          Submitted Apr 17,  Reviewed May 16, Publish May 30  Review Report
 
          [WORD]   [PDF]

     Towards establishing the molecular function of Pfam Domain DUF294 by sequence analysis and homology modeling       
          Gononesekere NCW, Beaudry S, Tasovsky I
10 (1):125-133, 2009
          Department of Chemistry and Biochemistry and Department of Biology, University of Northern Iowa, Cedar Falls, U.S.A.
          Submitted Apr 23,  Reviewed May 1, revised May 4, Publish May 30  Review Report

 

          [WORD]   [PDF]
     Phylogenetic analysis, homology modeling, molecular dynamics and structure based designing of new inhibitors against cinnamyl alcohol  dehydrogenase (CAD) cloned and sequenced from     

          leguminous tree subabul (Leucena leucocephala).

          Sekhar NP, Kumar RD, Sirisha VL, Prashant S Kavi Kishor PB 10 (1):103-124, 2009
         
Department of Genetics, Osmania University, Hyderabad, India.
          Submitted Apr 17,  Reviewed Apr 24, Accepted Apr 26, Publish May 30  Review Report

 

        [WORD]   [PDF] 

      Prediction of 3- dimensional structure of GL12 of Homo Sapiens

          Sreekanth P, Narayan J   10 (1):98-102, 2009 
         
Bioinformatics  Centre, Amity Institute of Biotechnology, Amity University,  India. .
          Submitted Aug 15,  Reviewed March 24, Accepted Mar 26, Publish April 30  Review Report

 

       [WORD]   [PDF]

     In silico identification of small interfering RNA (siRNA) in the putative genes of White Spot Syndrome virus

         Singh V, Somanski P   10 (1):93-97, 2009 
         
Bioinformatics Centre,  Biotech Park, Lucknow, India.
          Submitted Aug 21,  Reviewed March 19, Accepted Mar 20, Publish April 21  Review Report

 

        PrintView]   [PDF]

     Genetic algorithm self-adaptive mutation rate for DNA folding (GASAMR)

          Mezher MA, Khader AT   10 (1):82-92, 2009 
         
School of Engineering and Design,   School of Computer Science, UB8 3PH, West London, UK Brunel University, 11800, Universiti Sains Malaysia, Penang, Malaysia.
          Submitted Feb 1,  Reviewed March 11, Accepted Mar 14, Publish April 18  Review Report

 

          [WORD]   [PDF]

     A statistical method for verification of rareness in DNA sequences using sequence encoding

          Meena K, Menaka K, Sundar TV, Subramanian KR   10 (1):74-81, 2009 
          Departments of Computer Science,  I.T. & Applications and  M.C.A., Shrimati Indira Gandhi College and Postgraduate and Research Department of Physics, National College, India.

          Submitted Nov 1,  Reviewed March 9, Accepted Mar 11, Publish April 15  Review Report

 

         [PDF]

     Multiple contrast test for detecting monotonic does-relationship and FDR-adjusted confidence intervals for selected parameters in a microarray setting

         Lin D, Shkedy Z, Burzykowski T,  Yekutieli D, De Bondt A, Goehlmann H, Talloen W,  Bijnens L, 10 (1):67-73, 2009
            
Hasselt University, I-BioStat, Universitaire Campus, Diepenbeek, Belgium, Department of Statistics and Operation Research, School of Mathematical Sciences, Tel Aviv  University, Ramat Aviv, Israel,  J&JPRD - Biometrics 

         and Clinical Informatics, Beerse, Belgium..
         Submitted Mar 1,  Reviewed March 9, Accepted Mar 11, Publish April 2  Review Report

 

         [WORD]   [PDF]
    Prediction 0f 3-dimensional structure of ORF3 protein of genotype 1 hepatitis E virus

         Rathi B, Naik S, Sarangi AN, Aggarwal R, 10 (1):60-66, 2009
             
Biomedical Informatics Centre, Sanjay Gandhi Postgraduate Institute of Medical Sciences, Lucknow 226014, India.
          Submitted Jan 6,  Reviewed March 6, Accepted Mar 11, Publish April 2  Review Report

 

             [WORD]   [PDF] 

    A systematic approach to understanding E. coli responses to oxygen: from raw microarray data to pathways and published abstracts

         Maleki-Dizaji S, Holcombe M, Rolfe MD,  Fisher P  Green J,  Poole RK,   Graham AI,  SYSMO-SUMO consortium, 10 (1):51-59, 2009

              Department of Computer Science, The University of Sheffield,  Sheffield S1 4DP, United Kingdom. Department of Molecular Biology and Biotechnology, The University of Sheffield , Sheffield S10 2TN,

              United Kingdom. Department of  Computer Science, The  University of Manchester, Manchester M13 9PL, United Kingdom.
         Submitted Feb 13,  Reviewed Feb 15, Accepted Feb 16, Publish March 3 
Review Report

 

         [WORD]   [PDF]
    In silico identification of tandem inter/intra-generic genetic elements (TIGE) using a random nucleotide generating Perl program: A potential approach for locating structure-function regions of 

         recently sequenced genomes

         Jha PK, Stashenko P, 10 (1):40-50, 2009

              Division of Cytokine Biology, The Forsyth Institute, Harvard medical School Affiliate in Oral and Craniofacial Science, Boston, Massachussets, USA
       Submitted Jan 23,  Reviewed Jan 29, Accepted Feb 1, Publish Feb 15  Review Report

 

       PrintView]   [PDF]

    Derivation of a protein marker from  heat denatured protein aggregate

         Lahiri T, Mishra H, Kumar U, Misra K, 10 (1):29-39, 2009

              Division of Bioinformatics and Allied Sciences, Indian Institute of Information technology, Allahabad, India

         Submitted Sep 27,   reviewed Jan 15, accepted Jan 15, publish Feb 15  Review Report

 

         PrintView]   [PDF]
    Identification of potential targets and lead molecules for designing inhibitory drugs against Chlamydophila pneumoniae

         E Harikishan Reddy EH,  Satpathy GR, 10 (1): 14-28, 2009

              Department of Biotechnology and Medical Engineering, National Insitute of Technology, Rourkela-769008, India.

          Submitted Nov 28,   reviewed Jan 5, accepted Jan 10, published Jan 30  Review Report

 

          [WORD]   [PDF]

     Homology modelling, molecular dynamics and docking studies of human GLUT5 protein involved in intestinal transport

          Padmavathi GV, Saralakumari D, Nataraj Sekhar P 10 (1):1-13, 2009

      Department of Biochemistry, Sri Krishnadevaraya University, Anantapur,  India, and Katholic University, (leuven, Belgium

          Submitted Dec 3,   reviewed Dec 23,  Accepted Jan 4, published Jan 30  Review Report


2008 (2)

 

          [WORD]   [PDF 

     In silico analysis of PCR amplified DOF (DNA binding with one finger) transcription factor domain and cloned genes from cereals and millets

          Kushwaha H, Gupta N, Singh VK, Kumar A, Yadav D  9 (2):130-145, 2008

          Department of Molecular Biology and Genetic Engineering, College of Basic Sciences and Humanities, G.B. Pant University of Agriculture and Technology, Pantnagar (UttaraKhand), India

          Submitted Jul29,   reviewed Sep 1,  accepted Nov 25, published Dec 30  Review Report

 
        
 [WORD]   [PDF 

     MOTIFA (Motif Analizer) examination of interregional and intraregional distribution of short DNA motifs

          Sucaet Y, Magrath9 (2):121-129, 2008

          Biological and Environmental Science, Troy University, Troy, AL 36082, USA

          Submitted October 3,   reviewed October 17,  accepted October 23, published October 30  Review Report


          [WORD]   [PDF

     Homology based 3D-structure modeling of glucose specific Sesbania stem lectin

          Saxena S, Das HR, Das D, Biswas9 (2):113-120, 2008

          Proteomics and Structural Biology Laboratory, Institute of Genomics and Integrative Biology, Delhi University Campus, Mall Road 110007, India

          Submitted August 2,   reviewed August 20,  accepted August 21, published August 28  Review Report

 
         
PrintView]   [PDF ] 

     CateGOrizer: A web-based program to batch analyze gene ontology classification categories

          Hu Zhi-Liang, Bao J, Reecy JM  9 (2):108-112, 2008

          Department of Animal Science, Iowa State University, 2255 Kildee Hall and Department of Computer Science, Iowa State University, 226 Atanasoff Hall, Ames, Iowa 50011-3150, USA

          Submitted August 2,   Reviewed August 20,  Accepted August 21, published August 28  Review Report

          [WORD]   [PDF ] 

      In-silico study on interaction of active binding sites of proteins with calcium oxalate monohydrate

          Bijarnia RK, Kaur T, Naik PK, Singla SK, Tandon C  9 (2):92-107, 2008

          Department of Biotechnology and Bioinformatics, Jaypee University of Information Technology, Waknaghat, Solan and Department of Biochemistry, Panjab University, India

          Submitted February 26,   Reviewed May 23,  Accepted August 10, publish August 25 Review Report


2008 (1)

 

          [WORD]   [PDF ] 

     Identification of SSR-ESTs corresponding to alkaloid, phenylpropanoid and terpenoid biosynthesis in MAP's

          Tripathy KP, Roy S, Khan F Shasany AK, Sharma A, Khanuja SPS  9 (1):78-91, 2008

          Bioinformatics and In Silico Biology Division, Central Institute of Medicinal and Aromatic Plants (CSIR), Lucknow, India

          Submitted June 7,   Reviewed May 23, Accepted July 10, publish July 26 Review Report

 
         
PrintView]   [PDF ] 
      Prediction of the putative function of mouse WDR13 protein

          Murthy BSN,  Pandit MW, Singh L. 9 (1):60-77, 2008

          Centre for Cellular and Molecular Biology, Uppal Road, Hyderabad – 500 007; India

          Submitted March 11   Reviewed May 13, Accepted June 16, publish June 26 Review Report

 
          
[PDF]

      In silico experiments on a faulty ubiquitin-proteasome system in the pathogenesis of Parkinson's disease

          Lecca P.  9 (1): 30-43, 2008
          The Microsoft Research-University of Trento Centre for Computational and System Biology, Trento, Italy

        Submitted March 13   Reviewed March 27, Accepted April 8, publish April 30 Review Reports

 
         
[WORD]    [PDF]  

      A comparison of information on molecular interactions available in full-length publications versus abstracts
         
Mahadevan U, Bhate J, Raghunath A,  Kashyap S, Dey PC, Prakash N, Bhat B, Mol L, Wong, L  9 (1): 21-29, 2008
         
Molecular Connections Pvt. Ltd., Bangalore, India and Institute for Infocomm Research (I2R), Singapore.
          Submitted November 18   Reviewed September 23, Accepted January 17 Review Reports


           [WORD]    [PDF]

      Elucidating the role of CREBBP co-activator in erythroid differentiation by literature mining and analysis

          Iyer J, Raghunath A, Bhate J, Wong L,  9 (1): 12-20, 2008
         
Molecular Connections Pvt. Ltd, Basavanagudi, Bangalore, India, and National Institute of Singapore, Singapore.
          Submitted December 27   Reviewed January 23, Accepted January 25   Review Reports


          
PrintView]    [PDF] 

      In silico analysis of P5CS gene evolution in plants

           Kumari A1,  Patade VY, Suprasanna P, 9 (1): 1-11, 2008

           Plant Cell Culture Technology Section,  Nuclear Agriculture & Biotechnology Division, Bhabha Atomic Research Centre, Trombay, Mumbai 400 084. India.
           Submitted August 3   Reviewed August 23, December 16  Published January 12 
Review Reports     


2007 (2)

 

        

               [WORD]    [PDF] 

     Molecular evolution of archaeal CRISPR and Cas genes

          Chatterjee R, Dutta A, Chaudhuri K, 8 (2): 189-204, 2007

          Molecular & Human Genetics Division  Indian Institute of Chemical Biology, Jadavpur, Kolkata-700 032, India.

          Submitted October 12   Reviewed November 15   Published November 29  Review Reports


          [WORD]    [PDF]

      Structure and function prediction of a hypothetical protein (Q307B9_SPIPL) of Spirulina platensis (Nordstedt) Geitler
          Lakshmi PTV, Uma Maheswari S, Annamalai A,
8 (2): 179-188, 2007.
         
Phytomatics Laboratory, Department of Bioinformatics, Bharathiar University, Tamil Nadu, India, and School of Dietetics and Human Nutrition, McGill University, Macdonald Campus,  Montreal, Quebec

          Canada.              
         
Submitted August 15   Reviewed August 28   Published September 23  Review Reports 

 
         
PrintView]    [PDF] 

      Constructing phylogeny from whole genome alignment

           Chan PY, Lam TW, Liu CM, Yiu SM 8 (2) : 165-178, 2007
          
Department of Computer Science, The University of Hong Kong, Hong Kong

           Submitted July 14   Reviewed August 14, 22   Revised August 24  Published August 28  Review Reports

 
          
 
[WORD]    [PDF] 

      The 3D structure of the Japanese Encephalitis helicase, using homology based molecular modelling techniques

           Vlachakis D, Brancale8 (2) : 154-164, 2007
          
Welsh School of Pharmacy, Cardiff University, King Edward VII Avenue, Cardiff, CF10 3XF, United Kingdom
           Submitted August 2   Reviewed August 5   Revised August 6  Published August 14  Review Reports

 
          
 PrintView]    [PDF] 

      Shape-to-String Mapping: A Novel Approach To Clustering Time-Index Biomics Data

           Antoine W, Miernyk JA  8 (2) : 139-153, 2007
           Department of Biochemistry USDA, Agricultural Research Service, Plant Genetics Research Unit and Interdisciplinary Plant Group, University of Missouri, Columbia, USA
           Submitted June 20   Reviewed July 5-6   Revised July 14   Published July 16 
Review Reports


2007 (1)


         
PrintView]    [PDF]

      In-silico TAT-PTD prediction for cell penetrating peptides.

          Tandon C, Aggarwal A, Goel P, Sengupta D, Naik P,  8 (1) : 115-138, 2007

          Department of Biotechnology and Bioinformatics, Jaypee University of Information technology, Himachal, Pradesh, India

 
       
  {PrintView]   [PDF] 

      Binding Modes, binding Affinities and ADME Screening of HIV-1 NNRTI Inhibitor: Efavirnez and its analogues.

          Sengupta D, Verma D, Naik PK 8 (1) : 99-114, 2007

          Department of Bioinformatics and Biotechnology, Jaypee University of Information Technology, Waknaghat, Distt.-Solan, Himachal Pradesh, India.

          

          [WORD]   [PDF] 

     A Unified Framework for Finding Differentially Expressed Genes in MPTP Mouse Model for Parkinson’s Disease

          Shaik J, Yeasin M 8 (1) : 84-98, 2007

          CVPIA LAB, Department of Electrical and Computer Engineering, University of Memphis, Memphis, Tennessee, 38152, United States.

 
         
[WORD]
   [PDF] 

      In silico Cis-regulatory Element Analysis of Seed Storage Protein Promoters Cloned from Different Cultivars of Wheat, Rice and Oat

          Yadav D,  Singh VK, Singh NK  8 (1) : 75-83, 2007
          Department of Molecular Biology and Genetic Engineering, College of Basic Sciences and Humanities G.B. pant University of Agriculture and Technology, Pantnagar  (Uttarakhand) National Research Center
on

          Plant Biotechnology, Indian Agriculture Research Institute, New Delhi 110012.
         

           [WORD]   [PDF] 

      In Silico Identification of Antioxidant gene G6PD in Caenorhabditis elegans

           Jitendra N, Prachi S, Alpana V, Shakti S 8 (1) : 61-74, 2007

           Bioinformatics Centre, AIB, Amity University, Noida, UP, INDIA


            [WORD]   [PDF]  

      An Indigenous Integration System for Biodiversity Databases

           Sarinder KKS, Lim LHS, Dimyati K, Merican AF 8 (1) : 56-60, 2007
          
Institute of Biological Sciences, Faculty of Science, University of Malaya, and Department of Electrical Engineering, Faculty of Engineering, University of Malaya.


           [WORD]   [PDF]  

      Unbalanced Factorial Design: Type I, II and III Sums of Squares
          
Boyacioglu H, Baskan O 8 (1) : 56-55, 2007  

           Ege University Faculty of Science, Department of Statistics, Bornova, Turkey

 
        
   [WORD]   [PDF]  

      Comparative analysis of MMFF94x and AMBER99 force fields using aspartic-serine-metallo proteases and Sugar-Binding Proteins as different data sets.  
           Singh H, Marla SS, Verma D 8 (1) : 45-55, 2007

           Biotechnology and Bioinformatics Department, Jaypee University of Information Technology, Waknaghat, Solan (H.P.) India 173215

 
          
PrintView]   [PDF]  

      Database and interactome map of genes involved in oral cancer

           Gadewal NS, Zingde SM 8 (1) : 41-44, 2007

           Bioinformatics centre (BTIS Sub-DIC) and Advanced Centre for Treatment Research and Education in Cancer, Tata Memorial Centre, Kharghar, Navi Mumbai, 410210, India

 
          
[WORD]   [PDF] 

      PIDA: A new algorithm for pattern identification
           Putonti C, Pettitt BM, Reid JG, Fofanov Y 8 (1) : 30-40, 2007
          
Departments of Computer Science, Biology and Biochemistry, and Chemistry, University of Houston, Houston Texas, USA


        [WORD]   [PDF]  
      Plasma proteome knowledgebase: exploring disease biomarker correlations
           Iyer J, Srinivas VM, Khamari L, Sequeira JM, Das N, Periasamy UR, Bhate 8 (1) : 18-29, 2007
          
Molecular Connections Pvt. Ltd., Bangalore, India

 

         [WORD]   [PDF]  

      A comparison of information on molecular interactions available in full-length publications versus abstracts
         
Mahadevan U, Bhate J, Raghunath A,  Kashyap S, Dey PC, Prakash N, Bhat B, Zachariah LL, Wong, L  8 (1) : 8-17, 2007
         
Molecular Connections Pvt. Ltd., Bangalore, India, and National Institute of Singapore, Republic of Singapore


         [WORD]   [PDF]  
      In silico tools for evaluation of conservation homology among interleukins.
          Krupanidhi S, Madhukar SS, Doughman SD
  8 (1) : 1-7, 2007
          Department of Biosciences, Sri Sathya Sai Institute of  Higher Learning, Prasanthinilayam, Department of Bioinformatics, Sathyabama Institute of Science and Technology,

          Chennai-600 119 TN, India and  Department of Nutrition,  University of North Carolina, Chapel Hill, NC 27599 USA.


2006 (2)

 

           [WORD]   [PDF]  
      Plant promoter prediction tool and isolation of a promoter from Porteresis coarctata   
           Mahalakshmi S,
Krishna NC, Rao KV,  Reddy VD  7 (2) : 118 - 139, 2006
        
  Centre for Plant Molecular Biology, Osmania University, Hyderabad, India and SR Software, Jubilee Hills, Hyderabad, India


         PrintView]   [PDF]  
       A flexible spot recognition method for SNP microarray systems
            Huang CY, Liu L 7 (2) : 101-117, 2006
          
Center for Pharmacogenomics and Complex Disease Research, University of Medicine & Dentistry of New Jersey, Newark, NJ 07101, USA  and Department of Applied

           Mathematics, Chung Yuan  Christian  University, Chung-Li,  Taiwan 32023, ROC


         PrintView]   [PDF] 
       A computer-intensive method to analyse microarray experiments with a very small number of replications in case of heteroscedasticity
           
Muhammad MA, Neuhäuser M 7 (2) : 90-100, 2006
            Institute for Medical Informatics, Biometry and Epidemiology, University Hospital Essen, Hufelandstr. 55, D-45122 Essen and Department of Mathematics and Technique,

            RheinAhrCampus, Koblenz . University of Applied Science, Südallee 2, D-53424 Remagen, Germany.

 
           
 [WORD]   [PDF]  

       In silico Homology modeling and Structure assessment of Holo (Acyl Carrier Protein) synthetase from Treponema pallidum   
            Dowlathabad MR,  Venkata RD, Rallapalli R  7 (2) : 85 - 89, 2006

            Department of Biotechnology, Bioinformatics Laboratory and Department of Microbiology,
Sri Krishnadevaraya University, Anantapur-AP India 

 
          
  [WORD]   [PDF]  

        Structural Classification of Protein Using Surface Roughness Index
            
Singha S1, Lahiri T1, Dasgupta AK, Chakrabarti P 7 (2) : 74-84, 2006
             Department of Biotechnology, Institute of Engineering & Technology, U. P. Technical University, Sitapur Road, Lucknow,
India


            [WORD] [PDF]  
        Genomic predictions for T Lymphocyte epitopes on Plasmodium falciparum (Malaria)
             Singh SP, Khan F Mishra BN
7 (2) : 69-73, 2006
         
   Department of Biotechnology, Institute of Engineering & Technology, U. P. Technical University, Sitapur Road, Lucknow-226021 (U.P.)  India


            [WORD] [PDF] 
     
Conservation of the regulatory pho-box in acetoacetyl-CoA reductase promoters across bacterial PHB biosynthetic metabolic pathway
             Khan F, Singh SP, Mishra BN
7 (2) : 57-68, 2006

             Department of Biotechnology, Institute of Engineering & Technology, U. P. Technical University, Sitapur Road, Lucknow-226021 (U.P.) India

 


2006 (1)

            [WORD]  [PDF]
       Extending the Dynamic Range of Signal Intensities in DNA Microarrays
            Choi D, O’Malley JP, Lasarev MR, Lapidus J, Lu X, Pattee P, Nagalla SR 7 (1) : 46-56, 2006
            Division of Biostatistics, Department of Public Health and Preventive Medicine, Center for Biomarker Discovery, Department of Pediatrics, Center for Research on Occupational and Environmental  Toxicology,  Oregon

            Health & Science University, Oregon, USA.

 

         PrintView]  [PDF]

       Comparative structure analysis of Chorismate synthase   

            Marla S , Yalamanchili HK,  Gelli P, Singh HK, Praveen G, Ghatta G, Srikanth S, Goutham K. 7 (1) : 35-45, 2006

            Biotechnology and Bioinformatics Department, JayaPrakash University of Information technology, Solan, India.

 

         [WORD]  [PDF]
       Statistical Potential Determining Protein Interaction Sites

            Williams G 7 (1) : 32-34, 2006
          
 
Wolfson Centre for Age Related Diseases, The Wolfson Wing, Hodgkin Building, Kings College London, United Kingdom.

 

            [WORD]  [PDF
       Classification of incipient Alzheimer patients using gene expression data: Dealing with potential misdiagnosis
           Robbins K, Joseph S, Zhang W, Rekaya R,  Bertrand JK 7 (1) : 22-31, 2006

           Department of Animal and Dairy Science, and Statistics, University of Georgia, Athens, Georgia USA.

 

         [WORD] [PDF]
      Clusterer: extendable java application for sequence grouping and cluster analyses

           Klepac-Ceraj V, Ceraj I, Polz MF, 7 (1) 15-21, 2006
          
Information Services and Technology, and Department of Civil and Environmental Engineering, Massachusets Institute of  Technology (MIT), Cambridge, Massachusets USA.

 

         [WORD] [PDF]
       A correction for expression value dependencies in Affymetrix

            Broemel F, Kruse E, Neuhäuser M, Dürig J, JÖckel KH, 7 (1) : 1-14, 2006

            Institute for Medical Informatics, Biometry and Epidemiology, and Department of Hematology, University Hospital, Essen and Department of Botany, Faculty of Biology,  Technical University Darmstadt, Germany.


2005 (2)

          [WORD]  [PDF]

      Boosting Speed of MS/MS Peptide Sequencing via Database Search by Spectral Profile Comparison
        
Liu J, Carrillo B, Yanofsky C, Beaudrie C, Morales F, Kearney R  6 (2) 174-183, 2005

         Department of Biomedical Engineering, McGill University, Montreal Quebec, Canada.

 

         [WORD] [PDF]
     The Effect of Inverse Document Frequency Weights on DNA Sequence Retrieval
         
O'Kane KC  6 (2) 162-173, 2005

         Department of Computer Science, The University of Northern Iowa, Cedar Falls, Iowa 50613-0507, USA.

 

         [WORD]  [PDF]
    
 Binding of fork head protein to DNA partly determined by base cooperation.
         
Mach V  6 (2) 149-161, 2005
        
  Institute of Entomology, Czech Academy of Sciences, České Budějovice, Czech Republic.

 

            [WORD]  [PDF]

      Analysis of n-nary tract frequency in the genome

         Ophir D, Gera A  6 (2) 142-148, 2005

         Department of Computer Science and Mathematics, Ariel Academic College in Yudea and Samaria and ELTA Systems Ltd. Israel.

 

            [WORD] [PDF]
      
In silico identification of cis-regulatory elements in Mesorhizobium loti

  Khan F, Agrawal S, Mishra BN 6 (2) : 129-141, 2005
       Department of Biotechnology, Institute of Engineering & Technology and Jawahar Lal Nehru Center of Advanced Research, Bangalore, India.
 
          [WORD] [PDF]       

      A microarray model for computation of absolute gene expression level

          Xu, M 6 (2) : 121-128, 2005

          Gene21st, 19 Belcourt Rd. Worcester, MA 01605, USA.

 

         [WORD] [PDF]
      MIPE an XML format to facilitate the storage and exchange of PCR-related data

          Aerts JA, Veenendaal T 6 (2) : 114-120, 2005.

          Bioinformatics Group, Roslin Institute, United Kingdom, Animal Breeding and Genetics Group, Wageningen University, The Netherlands.

 


2005 (1)

   

            [PDF] 
       Automated Long Oligo Design on Consensus Regions of Similar Genomes
            Schretter C, Milinkovitch MC 6 (1) 107 -113, 2005
           
Unit of Evolutionary Genetics (UEG), Institute of Molecular Biology and Medicine (IBMM), Université Libre de Bruxelles (ULB).

 

           [WORD] [PDF]
       Combining Kernel Dimension-Reduction with Regularized Classifiers for Tissue Categorization
           
Shen L, Tan EC 6 (1) : 91-106, 2005
           
School of Computer Engineering, Nanyang Technological University, Singapore, 639798.

 

            [WORD] [PDF]
        In silico identification and modelling of a putative iron-regulated TonB-dependant outer membrane receptor protein from the genome of Leptospira interrogans serovar Lai
            Sritharan M, Ramadevi S, Pasupala N, Asuthkar S, Tajne S 6 (1) : 74-90, 2005

            Department of Animal Sciences, University of Hyderabad, Hyderabad, India; Informatics Division, GVK Biosciences Pvt Ltd, Hyderabad, India.

 

            [PDF]
        Eulerian Superpath Approach to Correct Sequencing Error in Shotgun Assembly

             Shi W, Zhou W, Zheng W 6 (1) : 65-73, 2005

             School of Information Technology, Deakin University, Australia, Institute of High Performance Computing, Department of Computer Science and Technology Tsinghua University, China.

 

            [WORD] [PDF]

       From prediction of subcellular localization to functional classification: Discrimination of DNA- packing and other nuclear proteins
            Höglund A, Dönnes P, Adolph HW, Kohlbacher O 6 (1) : 51-64, 2005
            Department(s) of Simulation of Biological Systems, WSI/ZBIT, Eberhard Karls University Tübingen, Sand 14, D-72076 Tübingen and Biochemistry and Center for Bioinformatics, Saarland University, D-66041, Saabrücken,

            Germany.

 

           [WORD] [PDF]

        Substitution of polymorphic amino acids in proteins:Predicting functional alterations using amino acid properties.
            
Baksi K, Bhattacharyya NP.  6 (1) : 42-50, 2005

             Crystallography and Molecular Biology Division, Saha Institute of Nuclear Physics, Kolkata 700 064, India.

 

                  [WORD] [PDF]

        Morphometric and Distance Computational Software for evolutionary studies.
           
Carvajal-Rodríguez A, Rodríguez MG   6 (1) : 34-41, 2005.
           
Departamento de Bioquímica, Genética e Inmunología, Facultad de Ciencias, Universidad de Vigo, 36310 VIGO, Spain.

 

            [PDF]

        Support vector machines and bioinformatics

             Sethi RJ  6 (1) : 22-33, 2005.

             Computer Science and Engineering Department and Marlan & Rosemary Bourns College of Engineering, University of California-Riverside, USA.

 

             [WORD] [PDF]

         A novel method to predict protein subcellular localizations
            
Huang J, Shi F, 6 (1) : 8-21, 2005.
             
Schools of Computer Science, Science, Mathematics and Statistics, Huazhong Agricultural University, Wuhan, Hubei province, P.R. China.

 

             [WORD] [PDF]
        MolVRML: build VRML models of 3D molecular structures
            
Zou Y,  6 (1) :1-7, 2005.
            
School of Computer Science and Information Technology, RMIT University, VIC 3001 Australia


2004

           

       Prediction of transcriptional regulation by Dlx and Msx homeodomain proteins
            Swarnalatha M, Jutur PP, Amouda V, Mathur PP, Reddy AR 5 : 132-145, 2004

            Bioinformatics Centre, Department of Biochemistry and Molecular Biology, School of Life Sciences, Pondicherry University, Pondicherry, India


            [WORD]  [PDF]
       In silico gene identification and homology modeling of Chorismate synthase in Clostridium difficile  

            Sunita T, Ramadevi S 5 :129-131, 2004.

            Informatics Division, GVK Biosciences Pvt Ltd, Hyderabad, India

 
          
 [WORD]  [PDF]

       MCM-Based clustering for time-course gene expression data

            Wu FX, Zhang WJ, Kusalik AJ  5 :102-128, 2004

            Division of Biomedical Engineering, Department of Computer Science, University of Saskatchewan, Saskatoon, Canada

 
         
   [WORD]  [PDF]

       Parallel DNA fragment assembly algorithm based on Eulerian superpath

            Zheng W, Shi W, Zhou W  5 : 91-101, 2004

            Institute of High Performance Computing Department of Computer Science and Technology Tsinghua University, China and School of Information Technology, Deakin

            University, Australia.

 
           
[WORD] [PDF]

       Bayesian mixture modelling of species divergence
            Adam A,  Mengersen K, Baker P
5 : 69-90, 2004.

            INSEE, CREST, Paris, France, Queensland University of Technology and CMIS, CSIRO, Australia


           [WORD] [PDF]
       Reliability of RNA secondary structure prediction with XNAfold

            Zou Y 5 : 59-68, 2004.

           School of Agriculture and Food Systems, University of Melbourne and School of Computer Science and Information Technology, RMIT University VIC 3001 Australia.


       
   [WORD] [PDF] 

       Wave analysis of microarray expression as predictor of gene expression in tumors.

            Gupta A, Agrawal S 5 : 49-58, 2004.

            Indian Institute of Information Technology Allahabad, Deoghat Jhalwa Campus, RajRooppur Road, India

 
          
  [WORD] [PDF]

        Phylogenetic clustering and secondary structural analysis of Plant Terpenoid Synthases

            Singh IV, Agrawal S, Khan F,  Mishra BN 5 : 32-48, 2004.

            Department of Biotechnology, Institute of Engineering & Technology, Uttar Pradesh and Bioinformatics Division Indian Institute of Information Technology, Allahabad,  India

 
           
  [WORD] [PDF]

        GASP: a new genetic algorithm (based on) surviving probability.

             Carvajal-Rodríguez A 5 : 23-31, 2004.

             Departamento de Bioquímica, Genética e Inmunología, Facultad de Ciencias Universidad de Vigo, 36200 VIGO, Spain


            
[WORD] [PDF]

         Prediction of protein homo-oligomers by incorporating quasi-sequence-order effect

             Zhang SW, Pan Q, Zhang HC, Wu YH, Shi JU 5 : 13-22, 2004.

             Department of Automatic Control, Northwestern Polytechnical University, Xi’an 710072, People’s Republic of China

    
            
 [WORD] [PDF]

        Molecular phylogenetics and functional evolution of major RNA recognition domains of recently cloned and characterized autoimmune RNA-binding

             particle

              Suleymanoglu E 5: 1-12, 2004.     

              Institute of Biochemistry, University of Vienna, Medical Faculty, Vienna Biocenter, Dr. Bohr-Gasse 9/3, A-1030, Vienna, Austria


2003


 

             [WORD] [PDF]
         Identification of GltC transcription factor binding DNA motifs and its novel co-regulated genes in nitrogen fixing bacteria

              Khan F,  Agrawal S,  Mishra BN   4:106-114, 2003

              Biotechnology Program, Institute of Engineering & Technology,Sitapur road, Lucknow-22, India.

 
           
  [WORD] [PDF]

         Matching carbohydrate-binding domains in Arabidopsis thaliana genome: development of a lectin database
              Moreno FB, Facó F, Ceccatto VM, Sampaio AH, Costa ABS, Freitas JLT, Nogueira LL, Lima ME,  Lima-Filho JL, Cavada BS,  4:96-105, 2003

              Departamento de Bioquímica e Biologia Molecular, Universidade Federal do Ceará, Fortaleza-CE Campus do Pici, Universidade Estadual do Ceará (UECE) , Departamento

              de Engenharia de Pesca, Universidade Federal do Ceará, Fortaleza-CE, Universidade Federal do Pernambuco (UFPE), Universidade Federal do Pernambuco(UFPE), Brazil.


2002


          [WORD] [PDF]
       In Silico Markovian Bioinformatics for predicting 1Ha-NMR chemical shifts in mouse Epidermis Growth  Factor(mEGF).
              Díaz HG, De Armas RR, Uriarte E. 3:83-95, 2002. 

              Chemical Bio-actives Center, Department of Chemistry, Central University of "Las Villas" 54830, Cuba. Department of Organic Chemistry,  Faculty of Pharmacy,  University of Santiago de Compostela 15706, Spain

 

            [WORD] [PDF]
         Simple Object Access Protocol (SOAP) for Bioinformatic Software Interoperability  

              Xia Y, Stinner RE, Wang X.  3:74-82, August 2002.

              NSF Center for IPM North Carolina State University, Raleigh, NC 27695-7553, 2 Department of Plant Pathology North Carolina State University Raleigh, NC 27695, USA.


         [WORD] [PDF]   

              BAO, A Biological and Chemical Ontology For Information Integration  

              Ben-Miled Z, Webster YW, Nianhua L, Bukres O, Nayar AK, Martin J, Oppelt R.  3:60-73, June 2002  

              Electrical Engineering Department, Purdue School of Eng. &: Tech. Computer &: Information Science, Purdue School of Science, Lilly Corporate Center, Eli Lilly and  Company, USA.


             [WORD] [PDF].

         A software package for drawing ideograms automatically.    

              BÖhringer S, GÖdde R, BÖhringer D, Schulte T, Epplen JT 3 : 51-59, May 2002
              Department of molecular human genetics,  Ruhr University Bochum, Department of ophthalmology, University clinics, Düsseldorf, Germany


             
 [WORD] [PDF]
         The corporate information factory as a Bioinformatics framework    

              Casey, RM  3:42-50, April 2002.  

              Agilent Technologies, Inc. Information Technology, Agilent Technologies, Inc. Headquarters 395 Page Mill Rd. Palo Alto, CA 94306,  USA


2001

 

             [WORD] [PDF]

         An unsupervised neural network approach for discovery of gene expression patterns in B-cell lymphoma .

              Azuaje F,  2:26-41, 2001. 

              Department of Computer Science, Trinity College, Ireland

 
           
 [WORD] [PDF]

         Development of a web-based informatics educational exercize in genomics.     

              Flower R 2:22-25, 2001  

              A/Professor, Department of Haematology and Transfusion Medicine, University of Sydney and Principal Scientist, PaLMS Transfusion Services, Northern Sydney Health


 1996-2000

 
           
 [WORD] [PDF]

         Bioinformatics and Extended Markup Language (XML).
              Guerrini VH, Jackson D
1:12-21, 2000.  

              Distributed Systems Technology Centre (DSTC) Pty. Ltd and school of Veterinary Science,  University of Queensland, St Lucia, Queensland 4172, Australia.


 Authors (Instructions) | Editors | Subscriptions | Impact factor 


Copyright © 2016 The Online Journal of Bioinformatics
All Rights Reserved OJB is a Trade Mark of The
Online Journal of Bioinformatics

 


©1996-2016 All Rights Reserved. Online Journal of Bioinformatics . You may not store these pages in any form except for your own personal use. All other usage or distribution is illegal under international copyright treaties. Permission to use any of these pages in any other way besides the  before mentioned must be gained in writing from the publisher. This article is exclusively copyrighted in its entirety to OJB publications. This article may be copied once but may not be, reproduced or  re-transmitted without the express permission of the editors. This journal satisfies the refereeing requirements (DEST) for the Higher Education Research Data Collection (Australia)  Linking: To link to this page or any pages linking to this page you must link directly to this page only here rather than put up your own page.


counterLegal Notices and Linking to this site